Index

A

allgather_wrapper() (in module pygeosx_tools.wrapper)

apply_regex_to_node() (in module geosx_xml_tools.xml_processor) apply_to_bins() (in module pygeosx_tools.mesh_interpolation)

B

buildUnits() (geosx_xml_tools.unit_manager.UnitManager method) built-in function pygeosx.apply_initial_conditions() pygeosx.finalize() pygeosx.initialize() pygeosx.reinit() pygeosx.run()

C

check_mpi_rank() (in module geosx_xml_tools.main) check_redundancy_level() (in module geosx_xml_tools.xml_redundancy_check) check_xml_redundancy() (in module geosx_xml_tools.xml_redundancy_check) close() (hdf5_wrapper.wrapper.hdf5_wrapper method) collect_xml_attributes() (in module geosx_xml_tools.attribute_coverage)

collect_xml_attributes_level() (in module geosx_xml_tools.attribute_coverage) convert_abaqus_to_gmsh() (in module geosx_mesh_tools.abaqus_converter) convert_abaqus_to_vtu() (in module geosx_mesh_tools.abaqus_converter) convert_E_nu_to_K_G() (in module pygeosx_tools.well_log) copy() (hdf5_wrapper.wrapper.hdf5_wrapper method)

D

DictRegexHandler (class in geosx_xml_tools.regex_tools)

E

estimate_shmin() (in module pygeosx_tools.well_log)

extrapolate_nan_values() (in module pygeosx_tools.mesh_interpolation)

F

format_attribute() (in module geosx_xml_tools.xml_formatter) format_file() (in module geosx_xml_tools.xml_formatter)

format_geosx_arguments() (in module geosx_xml_tools.main) format_xml_level() (in module geosx_xml_tools.xml_formatter)

G

gather_wrapper() (in module pygeosx_tools.wrapper) generate_random_name() (in module geosx_xml_tools.xml_processor) geosx_mesh_tools.abaqus_converter module geosx_xml_tools.attribute_coverage module geosx_xml_tools.main module geosx_xml_tools.regex_tools module geosx_xml_tools.table_generator module geosx_xml_tools.unit_manager module geosx_xml_tools.xml_formatter module

geosx_xml_tools.xml_processor module geosx_xml_tools.xml_redundancy_check module get_copy() (hdf5_wrapper.wrapper.hdf5_wrapper method) get_global_value_range() (in module pygeosx_tools.wrapper) get_group() (pygeosx.Group method) get_matching_wrapper_path() (in module pygeosx_tools.wrapper) get_random_realization() (in module pygeosx_tools.mesh_interpolation) get_realizations() (in module pygeosx_tools.mesh_interpolation) get_wrapper() (in module pygeosx_tools.wrapper) (pygeosx.Group method) get_wrapper_par() (in module pygeosx_tools.wrapper) getHistorySeries() (in module timehistory.plot_time_history) groups() (pygeosx.Group method)

H

hdf5_wrapper (class in hdf5_wrapper.wrapper)

hdf5_wrapper.wrapper module

I

insert() (hdf5_wrapper.wrapper.hdf5_wrapper method)

K

keys() (hdf5_wrapper.wrapper.hdf5_wrapper method)

L

link() (hdf5_wrapper.wrapper.hdf5_wrapper method)

load_tables() (in module pygeosx_tools.file_io)

M

main() (in module geosx_xml_tools.attribute_coverage) (in module geosx_xml_tools.xml_formatter) (in module geosx_xml_tools.xml_redundancy_check) merge_included_xml_files() (in module geosx_xml_tools.xml_processor) merge_xml_nodes() (in module geosx_xml_tools.xml_processor) module geosx_mesh_tools.abaqus_converter geosx_xml_tools.attribute_coverage geosx_xml_tools.main geosx_xml_tools.regex_tools geosx_xml_tools.table_generator geosx_xml_tools.unit_manager geosx_xml_tools.xml_formatter geosx_xml_tools.xml_processor geosx_xml_tools.xml_redundancy_check hdf5_wrapper.wrapper pygeosx_tools.file_io pygeosx_tools.mesh_interpolation pygeosx_tools.well_log pygeosx_tools.wrapper timehistory.plot_time_history

P

parse_las() (in module pygeosx_tools.well_log) parse_schema() (in module geosx_xml_tools.attribute_coverage) parse_schema_element() (in module geosx_xml_tools.attribute_coverage) plot_history() (in module pygeosx_tools.wrapper) preprocess_parallel() (in module geosx_xml_tools.main) preprocess_serial() (in module geosx_xml_tools.main) print_global_value_range() (in module pygeosx_tools.wrapper) process() (in module geosx_xml_tools.xml_processor) process_xml_files() (in module geosx_xml_tools.attribute_coverage) (in module geosx_xml_tools.xml_redundancy_check) pygeosx.apply_initial_conditions() built-in function pygeosx.COMPLETED (built-in variable) pygeosx.finalize() built-in function pygeosx.Group (built-in class) pygeosx.initialize() built-in function

pygeosx.INITIALIZED (built-in variable) pygeosx.READY_TO_RUN (built-in variable) pygeosx.reinit() built-in function pygeosx.run() built-in function pygeosx.UNINITIALIZED (built-in variable) pygeosx.Wrapper (built-in class) pygeosx_tools.file_io module pygeosx_tools.mesh_interpolation module pygeosx_tools.well_log module pygeosx_tools.wrapper module

R

read_GEOS_table() (in module geosx_xml_tools.table_generator) regexHandler() (geosx_xml_tools.unit_manager.UnitManager method)

register() (pygeosx.Group method) run_queries() (in module pygeosx_tools.wrapper)

S

save_tables() (in module pygeosx_tools.file_io) search_datastructure_wrappers_recursive() (in module pygeosx_tools.wrapper)

set_wrapper_to_value() (in module pygeosx_tools.wrapper) set_wrapper_with_function() (in module pygeosx_tools.wrapper) SymbolicMathRegexHandler() (in module geosx_xml_tools.regex_tools)

T

timehistory.plot_time_history module

U

UnitManager (class in geosx_xml_tools.unit_manager)

V

validate_xml() (in module geosx_xml_tools.xml_processor)

value() (pygeosx.Wrapper method) values() (hdf5_wrapper.wrapper.hdf5_wrapper method)

W

wait_for_file_write_rank_0() (in module geosx_xml_tools.main) wrappers() (pygeosx.Group method) write_attribute_usage_xml() (in module geosx_xml_tools.attribute_coverage)

write_attribute_usage_xml_level() (in module geosx_xml_tools.attribute_coverage) write_GEOS_table() (in module geosx_xml_tools.table_generator) write_read_GEOS_table_example() (in module geosx_xml_tools.table_generator)