GEOS
FaceElementSubRegion.hpp
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1 /*
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4  *
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12  * See top level LICENSE, COPYRIGHT, CONTRIBUTORS, NOTICE, and ACKNOWLEDGEMENTS files for details.
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15 
20 #ifndef GEOS_MESH_FACEELEMENTSUBREGION_HPP_
21 #define GEOS_MESH_FACEELEMENTSUBREGION_HPP_
22 
24 #include "mesh/generators/FaceBlockABC.hpp"
25 
26 namespace geos
27 {
28 
38 {
39 public:
40 
43 
48 
53  static string catalogName()
54  { return "FaceElementSubRegion"; }
55 
60  virtual string getCatalogName() const override
61  {
62  return catalogName();
63  }
64 
66 
71 
77  FaceElementSubRegion( string const & name,
78  dataRepository::Group * const parent );
79 
81 
86  void copyFromCellBlock( FaceBlockABC const & faceBlock );
87 
92 
93  virtual void calculateElementGeometricQuantities( NodeManager const & nodeManager,
94  FaceManager const & faceManager ) override;
101  arrayView1d< real64 const > const & faceArea );
102 
103  virtual localIndex packUpDownMapsSize( arrayView1d< localIndex const > const & packList ) const override;
104 
106  arrayView1d< localIndex const > const & packList ) const override;
107 
108  virtual localIndex unpackUpDownMaps( buffer_unit_type const * & buffer,
109  array1d< localIndex > & packList,
110  bool const overwriteUpMaps,
111  bool const overwriteDownMaps ) override;
112 
113 
120 
128  arrayView1d< localIndex const > const & packList ) const;
129 
139  array1d< localIndex > & packList,
140  bool const overwriteUpMaps,
141  bool const overwriteDownMaps );
142 
143 
144 
145  virtual void fixUpDownMaps( bool const clearIfUnmapped ) override;
146 
154  void fixSecondaryMappings( NodeManager const & nodeManager,
155  EdgeManager const & edgeManager,
156  FaceManager const & faceManager,
157  ElementRegionManager const & elemManager );
158 
160 
166  void inheritGhostRankFromParentFace( FaceManager const & faceManager,
167  std::set< localIndex > const & indices );
168 
180  ElementRegionManager const & elemManager );
181 
190  void flipFaceMap( FaceManager & faceManager,
191  ElementRegionManager const & elemManager );
192 
198  {
200  static constexpr char const * dNdXString() { return "dNdX"; }
202  static constexpr char const * detJString() { return "detJ"; }
204  static constexpr char const * edgesTofractureConnectorsEdgesString() { return "edgesToFractureConnectors"; }
206  static constexpr char const * fractureConnectorEdgesToEdgesString() { return "fractureConnectorsToEdges"; }
208  static constexpr char const * fractureConnectorsEdgesToFaceElementsIndexString() { return "fractureConnectorsToElementIndex"; }
210  static constexpr char const * elem2dToCollocatedNodesBucketsString() { return "elem2dToCollocatedNodesBuckets"; }
211 
212 #if GEOS_USE_SEPARATION_COEFFICIENT
214  constexpr static char const * separationCoeffString() { return "separationCoeff"; }
216  constexpr static char const * dSeparationCoeffdAperString() { return "dSeparationCoeffdAper"; }
217 #endif
218  };
219 
220  virtual void setupRelatedObjectsInRelations( MeshLevel const & mesh ) override;
221 
222 
228 
233  FaceMapType const & faceList() const
234  {
235  return m_toFacesRelation;
236  }
237 
242  {
243  return m_toFacesRelation;
244  }
246 
247 
253 
258  //virtual localIndex numNodesPerElement( localIndex const k ) const override { return m_toNodesRelation[k].size(); }
259 
260 #ifdef GEOS_USE_SEPARATION_COEFFICIENT
265  arrayView1d< real64 > getSeparationCoefficient() { return m_separationCoefficient; }
269  arrayView1d< real64 const > getSeparationCoefficient() const { return m_separationCoefficient; }
270 #endif
271 
273 
276 
279 
282 
285 
288 
291 
294 
299  std::set< std::set< globalIndex > > getCollocatedNodes() const;
300 
305  { return m_dNdX; }
306 
311  { return m_dNdX.toViewConst(); }
312 
317  { return m_detJ; }
318 
323  { return m_detJ; }
324 
326 
334 
342  {
343  return m_2dElemToCollocatedNodesBuckets.toViewConst();
344  }
345 
351  {
352  return m_2dElemToElems;
353  }
354 
359  {
360  return m_2dElemToElems;
361  }
362 
363 private:
364 
372  template< bool DO_PACKING >
373  localIndex packUpDownMapsImpl( buffer_unit_type * & buffer,
374  arrayView1d< localIndex const > const & packList ) const;
375 
376 
377  template< bool DO_PACKING >
378  localIndex packToFaceRelationImpl( buffer_unit_type * & buffer,
379  arrayView1d< localIndex const > const & packList ) const;
380 
382  array4d< real64 > m_dNdX;
383 
385  array2d< real64 > m_detJ;
386 
388  FaceMapType m_toFacesRelation;
389 
394  ArrayOfArrays< array1d< globalIndex > > m_2dElemToCollocatedNodesBuckets;
395 
397  FixedToManyElementRelation m_2dElemToElems;
398 
399 #ifdef GEOS_USE_SEPARATION_COEFFICIENT
401  array1d< real64 > m_separationCoefficient;
402 #endif
403 
404 };
405 
406 } /* namespace geos */
407 
408 #endif /* GEOS_MESH_FACEELEMENTSUBREGION_HPP_ */
This class provides an interface to ObjectManagerBase in order to manage edge data.
Definition: EdgeManager.hpp:43
The ElementRegionManager class provides an interface to ObjectManagerBase in order to manage ElementR...
ElementType getElementType() const
Get the type of element in this subregion.
Block of 2d elements (geometrical surfaces in 3d).
void inheritGhostRankFromParentFace(FaceManager const &faceManager, std::set< localIndex > const &indices)
Function to set the ghostRank for a list of FaceElements and set them to the value of their bounding ...
FixedToManyElementRelation & getToCellRelation()
Get the surface element to cells map.
ArrayOfArraysView< array1d< globalIndex > const > get2dElemToCollocatedNodesBuckets() const
Returns the 2d element to node to collocated nodes bucket mapping.
virtual string getCatalogName() const override
Get catalog name.
virtual void setupRelatedObjectsInRelations(MeshLevel const &mesh) override
Link the connectivity maps of the subregion to the managers storing the mesh information.
arrayView2d< real64 const > detJ() const
FaceMapType & faceList()
Get the face element to faces map.
FaceMapType const & faceList() const
Get the face element to faces map.
FixedOneToManyRelation FaceMapType
Face element to faces map type.
SortedArray< localIndex > m_recalculateConnectionsFor2dFaces
map from the edges to the fracture connectors index (edges that are fracture connectors)
FixedToManyElementRelation const & getToCellRelation() const
Get the surface element to cells map.
virtual localIndex packUpDownMapsSize(arrayView1d< localIndex const > const &packList) const override
Computes the pack size of the specific elements in the @ packList.
void calculateSingleElementGeometricQuantities(localIndex const k, arrayView1d< real64 const > const &faceArea)
Function to compute the geometric quantities of a specific face element.
virtual localIndex unpackUpDownMaps(buffer_unit_type const *&buffer, array1d< localIndex > &packList, bool const overwriteUpMaps, bool const overwriteDownMaps) override
Unpacks the specific elements in the @ packList.
ElementType getElementType(localIndex ei) const
Returns the type of element ei.
map< localIndex, array1d< globalIndex > > m_unmappedGlobalIndicesInToEdges
Get the number of nodes per face element.
void fixNeighboringFacesNormals(FaceManager &faceManager, ElementRegionManager const &elemManager)
Function to flip the face normals of faces adjacent to the faceElements if they are not pointing in t...
localIndex packToFaceRelation(buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList) const
Pack the FaceElement to face relation.
arrayView4d< real64 const > dNdX() const
map< localIndex, array1d< globalIndex > > m_unmappedGlobalIndicesInToFaces
Unmapped face elements to faces map.
static string catalogName()
Get catalog name.
FaceElementSubRegion(string const &name, dataRepository::Group *const parent)
Constructor.
void fixSecondaryMappings(NodeManager const &nodeManager, EdgeManager const &edgeManager, FaceManager const &faceManager, ElementRegionManager const &elemManager)
Fixes the mappings between the FaceElementSubRegion and regions next to it (e.g., matrix regions).
void copyFromCellBlock(FaceBlockABC const &faceBlock)
Fill the FaceElementSubRegion by copying those of the source face block.
SortedArray< localIndex > m_newFaceElements
List of the new face elements that have been generated.
void flipFaceMap(FaceManager &faceManager, ElementRegionManager const &elemManager)
Function to flip the face map based on the gloal index of the nighboring elements.
ArrayOfArrays< localIndex > m_2dFaceTo2dElems
A map of fracture connector local indices face element local indices.
virtual localIndex packUpDownMaps(buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList) const override
Packs the specific elements in the @ packList.
localIndex unpackToFaceRelation(buffer_unit_type const *&buffer, array1d< localIndex > &packList, bool const overwriteUpMaps, bool const overwriteDownMaps)
Unpack the FaceElement to face relation.
virtual void fixUpDownMaps(bool const clearIfUnmapped) override
Call ObjectManagerBase::fixUpDownMaps for the connectivity maps needed by the derived class (i....
std::set< std::set< globalIndex > > getCollocatedNodes() const
Computes and returns all the buckets of collocated nodes.
map< localIndex, localIndex > m_edgesTo2dFaces
A map of edge local indices to the fracture connector local indices.
virtual void calculateElementGeometricQuantities(NodeManager const &nodeManager, FaceManager const &faceManager) override
Calculate the geometric quantities for each element in the subregion.
localIndex packToFaceRelationSize(arrayView1d< localIndex const > const &packList) const
Size of packing of the FaceElement to face relation.
array1d< localIndex > m_2dFaceToEdge
A map of fracture connector local indices to edge local indices.
The FaceManager class provides an interface to ObjectManagerBase in order to manage face data.
Definition: FaceManager.hpp:44
Class facilitating the representation of a multi-level discretization of a MeshBody.
Definition: MeshLevel.hpp:42
The NodeManager class provides an interface to ObjectManagerBase in order to manage node data.
Definition: NodeManager.hpp:46
Base template for ordered and unordered maps.
Definition: DataTypes.hpp:329
ArrayView< T, 1 > arrayView1d
Alias for 1D array view.
Definition: DataTypes.hpp:180
Array< T, 2, PERMUTATION > array2d
Alias for 2D array.
Definition: DataTypes.hpp:192
LvArray::ArrayOfArraysView< T, INDEX_TYPE const, CONST_SIZES, LvArray::ChaiBuffer > ArrayOfArraysView
View of array of variable-sized arrays. See LvArray::ArrayOfArraysView for details.
Definition: DataTypes.hpp:286
GEOS_LOCALINDEX_TYPE localIndex
Local index type (for indexing objects within an MPI partition).
Definition: DataTypes.hpp:85
InterObjectRelation< array2d< localIndex > > FixedOneToManyRelation
A relationship from single objects to many other objects, where each object is related to the same nu...
LvArray::SortedArray< T, localIndex, LvArray::ChaiBuffer > SortedArray
A sorted array of local indices.
Definition: DataTypes.hpp:267
Array< T, 4, PERMUTATION > array4d
Alias for 4D array.
Definition: DataTypes.hpp:224
ElementType
Denotes type of cell/element shape.
Definition: ElementType.hpp:32
ArrayView< T, 4, USD > arrayView4d
Alias for 4D array view.
Definition: DataTypes.hpp:228
signed char buffer_unit_type
Type stored in communication buffers.
Definition: DataTypes.hpp:109
ArrayView< T, 2, USD > arrayView2d
Alias for 2D array view.
Definition: DataTypes.hpp:196
Array< T, 1 > array1d
Alias for 1D array.
Definition: DataTypes.hpp:176
LvArray::ArrayOfArrays< T, INDEX_TYPE, LvArray::ChaiBuffer > ArrayOfArrays
Array of variable-sized arrays. See LvArray::ArrayOfArrays for details.
Definition: DataTypes.hpp:282
Struct containing the keys to all face element views.
static constexpr char const * dNdXString()
static constexpr char const * detJString()
static constexpr char const * elem2dToCollocatedNodesBucketsString()
static constexpr char const * edgesTofractureConnectorsEdgesString()
static constexpr char const * fractureConnectorsEdgesToFaceElementsIndexString()
static constexpr char const * fractureConnectorEdgesToEdgesString()
Struct containing the keys to all surface element views.