GEOS
FaceElementSubRegion.hpp
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4  *
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12  * See top level LICENSE, COPYRIGHT, CONTRIBUTORS, NOTICE, and ACKNOWLEDGEMENTS files for details.
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15 
20 #ifndef GEOS_MESH_FACEELEMENTSUBREGION_HPP_
21 #define GEOS_MESH_FACEELEMENTSUBREGION_HPP_
22 
24 #include "mesh/generators/FaceBlockABC.hpp"
25 
26 namespace geos
27 {
28 
38 {
39 public:
40 
43 
48 
53  static string catalogName()
54  { return "FaceElementSubRegion"; }
55 
60  virtual string getCatalogName() const override
61  {
62  return catalogName();
63  }
64 
66 
71 
77  FaceElementSubRegion( string const & name,
78  dataRepository::Group * const parent );
79 
81 
86  void copyFromCellBlock( FaceBlockABC const & faceBlock );
87 
92 
93  virtual void calculateElementGeometricQuantities( NodeManager const & nodeManager,
94  FaceManager const & faceManager ) override;
101  arrayView1d< real64 const > const & faceArea );
102 
107  void calculateElementCentersOnly( NodeManager const & nodeManager );
108 
109  virtual localIndex packUpDownMapsSize( arrayView1d< localIndex const > const & packList ) const override;
110 
112  arrayView1d< localIndex const > const & packList ) const override;
113 
114  virtual localIndex unpackUpDownMaps( buffer_unit_type const * & buffer,
115  array1d< localIndex > & packList,
116  bool const overwriteUpMaps,
117  bool const overwriteDownMaps ) override;
118 
119 
126 
134  arrayView1d< localIndex const > const & packList ) const;
135 
145  array1d< localIndex > & packList,
146  bool const overwriteUpMaps,
147  bool const overwriteDownMaps );
148 
149 
150 
151  virtual void fixUpDownMaps( bool const clearIfUnmapped ) override;
152 
160  void fixSecondaryMappings( NodeManager const & nodeManager,
161  EdgeManager const & edgeManager,
162  FaceManager const & faceManager,
163  ElementRegionManager const & elemManager );
164 
166 
172  void inheritGhostRankFromParentFace( FaceManager const & faceManager,
173  std::set< localIndex > const & indices );
174 
186  ElementRegionManager const & elemManager );
187 
196  void flipFaceMap( FaceManager & faceManager,
197  ElementRegionManager const & elemManager );
198 
204  {
206  static constexpr char const * dNdXString() { return "dNdX"; }
208  static constexpr char const * detJString() { return "detJ"; }
210  static constexpr char const * edgesToFractureConnectorsEdgesString() { return "edgesToFractureConnectors"; }
212  static constexpr char const * fractureConnectorEdgesToEdgesString() { return "fractureConnectorsToEdges"; }
214  static constexpr char const * fractureConnectorsEdgesToFaceElementsIndexString() { return "fractureConnectorsToElementIndex"; }
216  static constexpr char const * elem2dToCollocatedNodesBucketsString() { return "elem2dToCollocatedNodesBuckets"; }
217 
218 #if GEOS_USE_SEPARATION_COEFFICIENT
220  constexpr static char const * separationCoeffString() { return "separationCoeff"; }
222  constexpr static char const * dSeparationCoeffdAperString() { return "dSeparationCoeffdAper"; }
223 #endif
224  };
225 
226  virtual void setupRelatedObjectsInRelations( MeshLevel const & mesh ) override;
227 
228 
234 
239  FaceMapType const & faceList() const
240  {
241  return m_toFacesRelation;
242  }
243 
248  {
249  return m_toFacesRelation;
250  }
252 
253 
259 
264  //virtual localIndex numNodesPerElement( localIndex const k ) const override { return m_toNodesRelation[k].size(); }
265 
266 #ifdef GEOS_USE_SEPARATION_COEFFICIENT
271  arrayView1d< real64 > getSeparationCoefficient() { return m_separationCoefficient; }
275  arrayView1d< real64 const > getSeparationCoefficient() const { return m_separationCoefficient; }
276 #endif
277 
279 
282 
285 
288 
291 
294 
297 
300 
305  std::set< std::set< globalIndex > > getCollocatedNodes() const;
306 
311  { return m_dNdX; }
312 
317  { return m_dNdX.toViewConst(); }
318 
323  { return m_detJ; }
324 
329  { return m_detJ; }
330 
332 
340 
348  {
349  return m_2dElemToCollocatedNodesBuckets.toViewConst();
350  }
351 
357  {
358  return m_2dElemToElems;
359  }
360 
365  {
366  return m_2dElemToElems;
367  }
368 
369 private:
370 
378  template< bool DO_PACKING >
379  localIndex packUpDownMapsImpl( buffer_unit_type * & buffer,
380  arrayView1d< localIndex const > const & packList ) const;
381 
382 
383  template< bool DO_PACKING >
384  localIndex packToFaceRelationImpl( buffer_unit_type * & buffer,
385  arrayView1d< localIndex const > const & packList ) const;
386 
388  array4d< real64 > m_dNdX;
389 
391  array2d< real64 > m_detJ;
392 
394  FaceMapType m_toFacesRelation;
395 
400  ArrayOfArrays< array1d< globalIndex > > m_2dElemToCollocatedNodesBuckets;
401 
403  FixedToManyElementRelation m_2dElemToElems;
404 
405 #ifdef GEOS_USE_SEPARATION_COEFFICIENT
407  array1d< real64 > m_separationCoefficient;
408 #endif
409 
410 };
411 
412 } /* namespace geos */
413 
414 #endif /* GEOS_MESH_FACEELEMENTSUBREGION_HPP_ */
This class provides an interface to ObjectManagerBase in order to manage edge data.
Definition: EdgeManager.hpp:43
The ElementRegionManager class provides an interface to ObjectManagerBase in order to manage ElementR...
ElementType getElementType() const
Get the type of element in this subregion.
Block of 2d elements (geometrical surfaces in 3d).
void inheritGhostRankFromParentFace(FaceManager const &faceManager, std::set< localIndex > const &indices)
Function to set the ghostRank for a list of FaceElements and set them to the value of their bounding ...
FixedToManyElementRelation & getToCellRelation()
Get the surface element to cells map.
ArrayOfArraysView< array1d< globalIndex > const > get2dElemToCollocatedNodesBuckets() const
Returns the 2d element to node to collocated nodes bucket mapping.
virtual string getCatalogName() const override
Get catalog name.
virtual void setupRelatedObjectsInRelations(MeshLevel const &mesh) override
Link the connectivity maps of the subregion to the managers storing the mesh information.
arrayView2d< real64 const > detJ() const
FaceMapType & faceList()
Get the face element to faces map.
FaceMapType const & faceList() const
Get the face element to faces map.
FixedOneToManyRelation FaceMapType
Face element to faces map type.
SortedArray< localIndex > m_recalculateConnectionsFor2dFaces
map from the edges to the fracture connectors index (edges that are fracture connectors)
FixedToManyElementRelation const & getToCellRelation() const
Get the surface element to cells map.
virtual localIndex packUpDownMapsSize(arrayView1d< localIndex const > const &packList) const override
Computes the pack size of the specific elements in the @ packList.
void calculateSingleElementGeometricQuantities(localIndex const k, arrayView1d< real64 const > const &faceArea)
Function to compute the geometric quantities of a specific face element.
virtual localIndex unpackUpDownMaps(buffer_unit_type const *&buffer, array1d< localIndex > &packList, bool const overwriteUpMaps, bool const overwriteDownMaps) override
Unpacks the specific elements in the @ packList.
ElementType getElementType(localIndex ei) const
Returns the type of element ei.
map< localIndex, array1d< globalIndex > > m_unmappedGlobalIndicesInToEdges
Get the number of nodes per face element.
void calculateElementCentersOnly(NodeManager const &nodeManager)
Computes centroids for all face elements from node positions.
void fixNeighboringFacesNormals(FaceManager &faceManager, ElementRegionManager const &elemManager)
Function to flip the face normals of faces adjacent to the faceElements if they are not pointing in t...
localIndex packToFaceRelation(buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList) const
Pack the FaceElement to face relation.
arrayView4d< real64 const > dNdX() const
map< localIndex, array1d< globalIndex > > m_unmappedGlobalIndicesInToFaces
Unmapped face elements to faces map.
static string catalogName()
Get catalog name.
FaceElementSubRegion(string const &name, dataRepository::Group *const parent)
Constructor.
void fixSecondaryMappings(NodeManager const &nodeManager, EdgeManager const &edgeManager, FaceManager const &faceManager, ElementRegionManager const &elemManager)
Fixes the mappings between the FaceElementSubRegion and regions next to it (e.g., matrix regions).
void copyFromCellBlock(FaceBlockABC const &faceBlock)
Fill the FaceElementSubRegion by copying those of the source face block.
SortedArray< localIndex > m_newFaceElements
List of the new face elements that have been generated.
void flipFaceMap(FaceManager &faceManager, ElementRegionManager const &elemManager)
Function to flip the face map based on the gloal index of the nighboring elements.
ArrayOfArrays< localIndex > m_2dFaceTo2dElems
A map of fracture connector local indices face element local indices.
virtual localIndex packUpDownMaps(buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList) const override
Packs the specific elements in the @ packList.
localIndex unpackToFaceRelation(buffer_unit_type const *&buffer, array1d< localIndex > &packList, bool const overwriteUpMaps, bool const overwriteDownMaps)
Unpack the FaceElement to face relation.
virtual void fixUpDownMaps(bool const clearIfUnmapped) override
Call ObjectManagerBase::fixUpDownMaps for the connectivity maps needed by the derived class (i....
std::set< std::set< globalIndex > > getCollocatedNodes() const
Computes and returns all the buckets of collocated nodes.
map< localIndex, localIndex > m_edgesTo2dFaces
A map of edge local indices to the fracture connector local indices.
virtual void calculateElementGeometricQuantities(NodeManager const &nodeManager, FaceManager const &faceManager) override
Calculate the geometric quantities for each element in the subregion.
localIndex packToFaceRelationSize(arrayView1d< localIndex const > const &packList) const
Size of packing of the FaceElement to face relation.
array1d< localIndex > m_2dFaceToEdge
A map of fracture connector local indices to edge local indices.
The FaceManager class provides an interface to ObjectManagerBase in order to manage face data.
Definition: FaceManager.hpp:44
Class facilitating the representation of a multi-level discretization of a MeshBody.
Definition: MeshLevel.hpp:42
The NodeManager class provides an interface to ObjectManagerBase in order to manage node data.
Definition: NodeManager.hpp:46
Base template for ordered and unordered maps.
ArrayView< T, 1 > arrayView1d
Alias for 1D array view.
Definition: DataTypes.hpp:179
Array< T, 2, PERMUTATION > array2d
Alias for 2D array.
Definition: DataTypes.hpp:191
LvArray::ArrayOfArraysView< T, INDEX_TYPE const, CONST_SIZES, LvArray::ChaiBuffer > ArrayOfArraysView
View of array of variable-sized arrays. See LvArray::ArrayOfArraysView for details.
Definition: DataTypes.hpp:285
GEOS_LOCALINDEX_TYPE localIndex
Local index type (for indexing objects within an MPI partition).
Definition: DataTypes.hpp:84
InterObjectRelation< array2d< localIndex > > FixedOneToManyRelation
A relationship from single objects to many other objects, where each object is related to the same nu...
LvArray::SortedArray< T, localIndex, LvArray::ChaiBuffer > SortedArray
A sorted array of local indices.
Definition: DataTypes.hpp:266
Array< T, 4, PERMUTATION > array4d
Alias for 4D array.
Definition: DataTypes.hpp:223
ElementType
Denotes type of cell/element shape.
Definition: ElementType.hpp:32
ArrayView< T, 4, USD > arrayView4d
Alias for 4D array view.
Definition: DataTypes.hpp:227
signed char buffer_unit_type
Type stored in communication buffers.
Definition: DataTypes.hpp:108
ArrayView< T, 2, USD > arrayView2d
Alias for 2D array view.
Definition: DataTypes.hpp:195
Array< T, 1 > array1d
Alias for 1D array.
Definition: DataTypes.hpp:175
LvArray::ArrayOfArrays< T, INDEX_TYPE, LvArray::ChaiBuffer > ArrayOfArrays
Array of variable-sized arrays. See LvArray::ArrayOfArrays for details.
Definition: DataTypes.hpp:281
Struct containing the keys to all face element views.
static constexpr char const * dNdXString()
static constexpr char const * detJString()
static constexpr char const * elem2dToCollocatedNodesBucketsString()
static constexpr char const * fractureConnectorsEdgesToFaceElementsIndexString()
static constexpr char const * fractureConnectorEdgesToEdgesString()
static constexpr char const * edgesToFractureConnectorsEdgesString()
Struct containing the keys to all surface element views.