#include <ParticleBlockABC.hpp>

Inheritance diagram for geos::ParticleBlockABC:

Public Member Functions
	ParticleBlockABC (string const &name, Group *const parent)
	Constructor. More...

virtual ParticleType	getParticleType () const =0
	Get the type of particle in this subregion. More...

virtual array1d< globalIndex >	getParticleID () const =0
	Get the list of particle global IDs in this subregion. More...

virtual array1d< int >	getParticleGroup () const =0
	Get the list of particle group numbers (for contact) in this subregion. More...

virtual array1d< int >	getParticleSurfaceFlag () const =0
	Get the list of particle surface flag values in this subregion. More...

virtual array1d< real64 >	getParticleDamage () const =0
	Get the list of particle damage values in this subregion. More...

virtual array1d< real64 >	getParticleStrengthScale () const =0
	Get the list of particle strength scale values in this subregion. More...

virtual array2d< real64 >	getParticleCenter () const =0
	Get the list of particle center locations in this subregion. More...

virtual array2d< real64 >	getParticleVelocity () const =0
	Get the list of particle velocities in this subregion. More...

virtual array2d< real64 >	getParticleMaterialDirection () const =0
	Get the list of particle material directions in this subregion. More...

virtual array1d< real64 >	getParticleVolume () const =0
	Get the list of particle volumes in this subregion. More...

virtual array3d< real64 >	getParticleRVectors () const =0
	Get the list of particle r-vectors in this subregion. More...

virtual bool	hasRVectors () const =0
	Query whether this subregion has particles of a type that have r-vectors that depend on the deformation gradient. More...

virtual localIndex	numParticles () const =0
	Get the number of particles. More...

virtual array1d< globalIndex >	localToGlobalMap () const =0
	Get local to global map. More...

template<typename LAMBDA >
void	forExternalProperties (LAMBDA &&lambda)
	Helper function to apply a lambda function over all the external properties of the subregion. More...

Public Member Functions inherited from geos::dataRepository::Group
virtual bool	registerCallback (void *func, const std::type_info &funcType)
	Register a callback function on the group. More...

virtual void	reinit ()
	Performs re-initialization of certain variable depending on the solver being used.

	Group (string const &name, Group *const parent)
	Constructor. More...

	Group (string const &name, conduit::Node &rootNode)
	Constructor. More...

	Group (Group &&source)=default
	Move constructor. More...

virtual	~Group ()
	Destructor, deletes all Groups and Wrappers owned by this Group.

	Group ()=delete
	Deleted default constructor.

	Group (Group const &)=delete
	Deleted copy constructor.

Group &	operator= (Group const &)=delete
	Deleted copy assignment operator. More...

Group &	operator= (Group &&)=delete
	Deleted move assignment operator. More...

void	printDataHierarchy (integer indent=0) const
	Prints the data hierarchy recursively. More...

string	dumpInputOptions () const

string	dumpSubGroupsNames () const

string	dumpWrappersNames () const

template<typename T = Group>
T &	registerGroup (string const &name, std::unique_ptr< T > newObject)
	Register a new Group as a sub-group of current Group. More...

template<typename T = Group>
T &	registerGroup (string const &name, T *newObject)
	Register a new Group as a sub-group of current Group. More...

template<typename T = Group>
T &	registerGroup (string const &name)
	Register a new Group as a sub-group of current Group. More...

template<typename T = Group>
T &	registerGroup (subGroupMap::KeyIndex const &keyIndex)
	Register a new Group as a sub-group of current Group. More...

template<typename T = Group, typename TBASE = Group>
T &	registerGroup (string const &name, string const &catalogName)
	Register a new Group as a sub-group of current Group. More...

void	deregisterGroup (string const &name)
	Removes a child group from this group. More...

virtual Group *	createChild (string const &childKey, string const &childName)
	Creates a new sub-Group using the ObjectCatalog functionality. More...

template<typename T = Group, typename KEY = void>
T *	getGroupPointer (KEY const &key)
	Return a pointer to a sub-group of the current Group. More...

template<typename T = Group, typename KEY = void>
const T *	getGroupPointer (KEY const &key) const
	Return a pointer to a sub-group of the current Group. More...

template<typename T = Group, typename KEY = void>
T &	getGroup (KEY const &key)
	Return a reference to a sub-group of the current Group. More...

template<typename T = Group, typename KEY = void>
const T &	getGroup (KEY const &key) const
	Return a reference to a sub-group of the current Group. More...

template<typename T = Group>
T &	getGroupByPath (string const &path)
	Retrieve a group from the hierarchy using a path. More...

template<typename T = Group>
const T &	getGroupByPath (string const &path) const
	Retrieve a group from the hierarchy using a path. More...

subGroupMap &	getSubGroups ()
	Get the subgroups object. More...

const subGroupMap &	getSubGroups () const
	Get the subgroups object. More...

localIndex	numSubGroups () const
	return the number of sub groups in this Group More...

std::vector< string >	getSubGroupsNames () const

template<typename T = Group>
bool	hasGroup (string const &name) const
	Check whether a sub-group exists. More...

template<typename T >
bool	hasSubGroupOfType () const
	Check whether a sub-group exists by type. More...

template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA >
void	forSubGroups (LAMBDA &&lambda)
	Apply the given functor to subgroups that can be casted to one of specified types. More...

template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA >
void	forSubGroups (LAMBDA &&lambda) const
	Apply the given functor to subgroups that can be casted to one of specified types. More...

template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA >
void	forSubGroupsIndex (LAMBDA &&lambda)
	Apply the given functor to subgroups that can be casted to one of specified types. More...

template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA >
void	forSubGroupsIndex (LAMBDA &&lambda) const
	Apply the given functor to subgroups that can be casted to one of specified types. More...

template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LOOKUP_CONTAINER , typename LAMBDA >
void	forSubGroups (LOOKUP_CONTAINER const &subGroupKeys, LAMBDA &&lambda)
	Apply the given functor to subgroups that can be casted to one of specified types. More...

template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LOOKUP_CONTAINER , typename LAMBDA >
void	forSubGroups (LOOKUP_CONTAINER const &subGroupKeys, LAMBDA &&lambda) const
	Apply the given functor to subgroups that can be casted to one of specified types. More...

template<typename LAMBDA >
void	forWrappers (LAMBDA &&lambda)
	Apply the given functor to wrappers. More...

template<typename LAMBDA >
void	forWrappers (LAMBDA &&lambda) const
	Apply the given functor to wrappers. More...

template<typename TYPE , typename ... TYPES, typename LAMBDA >
void	forWrappers (LAMBDA &&lambda)
	Apply the given functor to wrappers that can be cast to one of specified types. More...

template<typename TYPE , typename ... TYPES, typename LAMBDA >
void	forWrappers (LAMBDA &&lambda) const
	Apply the given functor to wrappers that can be cast to one of specified types. More...

virtual void	initialize_postMeshGeneration ()
	initialization post generation of the mesh.

void	initialize ()
	Run initialization functions on this and all subgroups. More...

virtual void	initializationOrder (string_array &order)
	Sets the initialization order for sub-Groups. More...

void	initializePostInitialConditions ()
	Initialization routine to be called after calling ApplyInitialConditions(). More...

void	postRestartInitializationRecursive ()
	Initialization routine to be called after calling reading a restart file. More...

void	processInputFileRecursive (xmlWrapper::xmlDocument &xmlDocument, xmlWrapper::xmlNode &targetNode)
	Recursively read values using ProcessInputFile() from the input file and put them into the wrapped values for this group. Also add the includes content to the xmlDocument when `Include` nodes are encountered. More...

void	processInputFileRecursive (xmlWrapper::xmlDocument &xmlDocument, xmlWrapper::xmlNode &targetNode, xmlWrapper::xmlNodePos const &nodePos)
	Same as processInputFileRecursive(xmlWrapper::xmlDocument &, xmlWrapper::xmlNode &) but allow to reuse an existing xmlNodePos. More...

void	postProcessInputRecursive ()
	Recursively call postProcessInput() to apply post processing after reading input values.

template<typename T , typename TBASE = T>
Wrapper< TBASE > &	registerWrapper (string const &name, wrapperMap::KeyIndex::index_type *const rkey=nullptr)
	Create and register a Wrapper around a new object. More...

template<typename T , typename TBASE = T>
Wrapper< TBASE > &	registerWrapper (Group::wrapperMap::KeyIndex const &viewKey)
	Create and register a Wrapper around a new object. More...

template<typename T >
Wrapper< T > &	registerWrapper (string const &name, std::unique_ptr< T > newObject)
	Register a Wrapper around a given object and take ownership. More...

template<typename T >
Wrapper< T > &	registerWrapper (string const &name, T *newObject)
	Register a Wrapper around an existing object, does not take ownership of the object. More...

WrapperBase &	registerWrapper (std::unique_ptr< WrapperBase > wrapper)
	Register and take ownership of an existing Wrapper. More...

void	deregisterWrapper (string const &name)
	Removes a Wrapper from this group. More...

void	generateDataStructureSkeleton (integer const level)
	Build a complete datastructure for schema generation. More...

virtual void	expandObjectCatalogs ()
	Expand any catalogs in the data structure.

virtual void	setSchemaDeviations (xmlWrapper::xmlNode schemaRoot, xmlWrapper::xmlNode schemaParent, integer documentationType)
	Inform the schema generator of any deviations between the xml and GEOS data structures. More...

virtual void	registerDataOnMeshRecursive (Group &meshBodies)
	Calls RegisterDataOnMesh() recursively. More...

virtual void	registerDataOnMesh (Group &meshBodies)
	Register data on mesh entities. More...

virtual localIndex	packSize (string_array const &wrapperNames, integer const recursive, bool onDevice, parallelDeviceEvents &events) const
	Get the size required to pack a list of wrappers. More...

virtual localIndex	packSize (string_array const &wrapperNames, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const
	Get the size required to pack a list of indices within a list of wrappers. More...

localIndex	packSize (arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const
	Get the size required to pack a list of indices for all registered wrappers. More...

virtual localIndex	pack (buffer_unit_type *&buffer, string_array const &wrapperNames, integer const recursive, bool onDevice, parallelDeviceEvents &events) const
	Pack a list of wrappers to a buffer. More...

virtual localIndex	pack (buffer_unit_type *&buffer, string_array const &wrapperNames, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const
	Pack a list of indices within a list of wrappers. More...

localIndex	pack (buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const
	Pack a list of indices for all registered wrappers. More...

virtual localIndex	unpack (buffer_unit_type const *&buffer, arrayView1d< localIndex > &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events, MPI_Op op=MPI_REPLACE)
	Unpack a buffer. More...

template<typename KEY >
const WrapperBase &	getWrapperBase (KEY const &key) const
	Return a reference to a WrapperBase stored in this group. More...

template<typename KEY >
WrapperBase &	getWrapperBase (KEY const &key)
	Return a reference to a WrapperBase stored in this group. More...

indexType	getWrapperIndex (string const &name) const

const wrapperMap &	wrappers () const
	Get access to the internal wrapper storage. More...

wrapperMap &	wrappers ()
	Get access to the internal wrapper storage. More...

indexType	numWrappers () const
	Return the number of wrappers. More...

std::vector< string >	getWrappersNames () const

template<typename LOOKUP_TYPE >
bool	hasWrapper (LOOKUP_TYPE const &lookup) const
	Check if a wrapper exists. More...

template<typename T , typename LOOKUP_TYPE >
const Wrapper< T > &	getWrapper (LOOKUP_TYPE const &index) const
	Retrieve a Wrapper stored in this group. More...

template<typename T , typename LOOKUP_TYPE >
Wrapper< T > &	getWrapper (LOOKUP_TYPE const &index)
	Retrieve a Wrapper stored in this group. More...

template<typename T , typename LOOKUP_TYPE >
const Wrapper< T > *	getWrapperPointer (LOOKUP_TYPE const &index) const
	Retrieve a Wrapper stored in this group. More...

template<typename T , typename LOOKUP_TYPE >
Wrapper< T > *	getWrapperPointer (LOOKUP_TYPE const &index)
	Retrieve a Wrapper stored in this group. More...

template<typename T , typename LOOKUP_TYPE >
GEOS_DECLTYPE_AUTO_RETURN	getReference (LOOKUP_TYPE const &lookup) const
	Look up a wrapper and get reference to wrapped object. More...

template<typename T , typename LOOKUP_TYPE >
T &	getReference (LOOKUP_TYPE const &lookup)
	Look up a wrapper and get reference to wrapped object. More...

virtual void	resize (localIndex const newSize)
	Resize the group and all contained wrappers that resize with parent. More...

virtual void	reserve (indexType const newsize)
	Set the new capacity and reserve it in all wrappers that resize with parent. More...

localIndex	capacity () const
	Get the "capacity" of the group, which determines the capacity of resizable wrappers. More...

localIndex	size () const
	Get the "size" of the group, which determines the number of elements in resizable wrappers. More...

const string &	getName () const
	Get group name. More...

string	getPath () const
	Return the path of this Group in the data repository. Starts with '/' followed by the hierarchy of the children of the "Problem" in which the Group is. More...

const DataContext &	getDataContext () const

template<typename KEY >
const DataContext &	getWrapperDataContext (KEY key) const

Group &	getParent ()
	Access the group's parent. More...

const Group &	getParent () const
	Access the group's parent. More...

bool	hasParent () const

localIndex	getIndexInParent () const
	Get the group's index within its parent group. More...

localIndex	getSubGroupIndex (keyType const &key) const
	Get the index of a sub-Group within this group. More...

int	sizedFromParent () const
	Check whether this Group is resized when its parent is resized. More...

Group &	setSizedFromParent (int val)
	Set whether this wrapper is resized when its parent is resized. More...

RestartFlags	getRestartFlags () const
	Get flags that control restart output of this group. More...

void	setRestartFlags (RestartFlags flags)
	Set flags that control restart output of this group. More...

InputFlags	getInputFlags () const
	Get input flags for schema generation. More...

void	setInputFlags (InputFlags flags)
	Set input flags for schema generation. More...

conduit::Node &	getConduitNode ()
	Return the Conduit node object associated with this group. More...

const conduit::Node &	getConduitNode () const
	Return the Conduit node object associated with this group. More...

void	prepareToWrite ()
	Register the group and its wrappers with Conduit.

void	finishWriting ()
	Write the group and its wrappers into Conduit.

void	loadFromConduit ()
	Read the group and its wrappers from Conduit.

void	enableLogLevelInput ()
	Enable verbosity input for object.

void	setLogLevel (integer const logLevel)
	Set verbosity level. More...

integer	getLogLevel () const

Additional Inherited Members
Public Types inherited from geos::dataRepository::Group
using	subGroupMap = MappedVector< Group, Group *, keyType, indexType >
	The template specialization of MappedVector to use for the collection of sub-Group objects.

using	wrapperMap = MappedVector< WrapperBase, WrapperBase *, keyType, indexType >
	The template specialization of MappedVector to use for the collection wrappers objects.

using	CatalogInterface = dataRepository::CatalogInterface< Group, string const &, Group *const >
	Type alias for catalog interface used by this class. See CatalogInterface.

Static Public Member Functions inherited from geos::dataRepository::Group
template<typename T0 , typename T1 , typename ... CASTTYPES, typename CONTAINERTYPE , typename LAMBDA >
static bool	applyLambdaToContainer (CONTAINERTYPE &container, LAMBDA &&lambda)
	Apply a given functor to a container if the container can be cast to one of the specified types. More...

static CatalogInterface::CatalogType &	getCatalog ()
	Get the singleton catalog for this class. More...

Protected Member Functions inherited from geos::dataRepository::Group
virtual void	postProcessInput ()

virtual void	initializePreSubGroups ()
	Called by Initialize() prior to initializing sub-Groups.

virtual void	initializePostSubGroups ()
	Called by Initialize() after to initializing sub-Groups.

virtual void	initializePostInitialConditionsPreSubGroups ()
	Called by InitializePostInitialConditions() prior to initializing sub-Groups.

virtual void	initializePostInitialConditionsPostSubGroups ()
	Called by InitializePostInitialConditions() after to initializing sub-Groups.

virtual void	postRestartInitialization ()
	Performs initialization required after reading from a restart file.

Detailed Description

Abstract base class defining the information provided by any particle block implementation. Mainly particle type-related information (TODO put an example here), a local to global mapping and some kind of accessors to external properties.

The particles of ParticleBlockABC are all of the same kind.

It's noteworthy that the ParticleBlockABC is immutable oriented. The derived implementations need to have the modification/creation capabilities.

Definition at line 38 of file ParticleBlockABC.hpp.

Constructor & Destructor Documentation

◆ ParticleBlockABC()

geos::ParticleBlockABC::ParticleBlockABC	(	string const &	name,
		Group *const	parent
	)

inline

Constructor.

Parameters

name	The name of this Group.
parent	The parent Group.

Definition at line 47 of file ParticleBlockABC.hpp.

Member Function Documentation

◆ forExternalProperties()

template<typename LAMBDA >

void geos::ParticleBlockABC::forExternalProperties ( LAMBDA && lambda )

inline

Helper function to apply a lambda function over all the external properties of the subregion.

Template Parameters

LAMBDA the type of the lambda function

Parameters

lambda lambda function that is applied to the wrappers of external properties

Note: Unlike the other member functions of this class, this current member function is not abstract, mainly because it's a template method. The abstraction is delegated to private method getExternalProperties.; There is some constness concern for this member function.

See also: getExternalProperties()

Definition at line 148 of file ParticleBlockABC.hpp.

◆ getParticleCenter()

virtual array2d< real64 > geos::ParticleBlockABC::getParticleCenter ( ) const

pure virtual

Get the list of particle center locations in this subregion.

Returns: the list of particle center locations in this subregion.

Implemented in geos::ParticleBlock.

◆ getParticleDamage()

virtual array1d< real64 > geos::ParticleBlockABC::getParticleDamage ( ) const

pure virtual

Get the list of particle damage values in this subregion.

Returns: the list of particle damage values in this subregion.

Implemented in geos::ParticleBlock.

◆ getParticleGroup()

virtual array1d< int > geos::ParticleBlockABC::getParticleGroup ( ) const

pure virtual

Get the list of particle group numbers (for contact) in this subregion.

Returns: the list of particle group numbers (for contact) in this subregion.

Implemented in geos::ParticleBlock.

◆ getParticleID()

virtual array1d< globalIndex > geos::ParticleBlockABC::getParticleID ( ) const

pure virtual

Get the list of particle global IDs in this subregion.

Returns: the list of particle global IDs in this subregion.

Implemented in geos::ParticleBlock.

◆ getParticleMaterialDirection()

virtual array2d< real64 > geos::ParticleBlockABC::getParticleMaterialDirection ( ) const

pure virtual

Get the list of particle material directions in this subregion.

Returns: the list of particle material directions in this subregion.

Implemented in geos::ParticleBlock.

◆ getParticleRVectors()

virtual array3d< real64 > geos::ParticleBlockABC::getParticleRVectors ( ) const

pure virtual

Get the list of particle r-vectors in this subregion.

Returns: the list of particle r-vectors in this subregion.

Implemented in geos::ParticleBlock.

◆ getParticleStrengthScale()

virtual array1d< real64 > geos::ParticleBlockABC::getParticleStrengthScale ( ) const

pure virtual

Get the list of particle strength scale values in this subregion.

Returns: the list of particle strength scale values in this subregion.

Implemented in geos::ParticleBlock.

◆ getParticleSurfaceFlag()

virtual array1d< int > geos::ParticleBlockABC::getParticleSurfaceFlag ( ) const

pure virtual

Get the list of particle surface flag values in this subregion.

Returns: the list of particle surface flag values in this subregion.

Implemented in geos::ParticleBlock.

◆ getParticleType()

virtual ParticleType geos::ParticleBlockABC::getParticleType ( ) const

pure virtual

Get the type of particle in this subregion.

Returns: an enum specifying the type of particle in this subregion

Implemented in geos::ParticleBlock.

◆ getParticleVelocity()

virtual array2d< real64 > geos::ParticleBlockABC::getParticleVelocity ( ) const

pure virtual

Get the list of particle velocities in this subregion.

Returns: the list of particle velocities in this subregion.

Implemented in geos::ParticleBlock.

◆ getParticleVolume()

virtual array1d< real64 > geos::ParticleBlockABC::getParticleVolume ( ) const

pure virtual

Get the list of particle volumes in this subregion.

Returns: the list of particle volumes in this subregion.

Implemented in geos::ParticleBlock.

◆ hasRVectors()

virtual bool geos::ParticleBlockABC::hasRVectors ( ) const

pure virtual

Query whether this subregion has particles of a type that have r-vectors that depend on the deformation gradient.

Returns: a bool indicating whether particles on this subregion have r-vectors that depend on the deformation gradient

Implemented in geos::ParticleBlock.

◆ localToGlobalMap()

virtual array1d< globalIndex > geos::ParticleBlockABC::localToGlobalMap ( ) const

pure virtual

Get local to global map.

Returns: The mapping relationship as an array.

Implemented in geos::ParticleBlock.

◆ numParticles()

virtual localIndex geos::ParticleBlockABC::numParticles ( ) const

pure virtual

Get the number of particles.

Returns: number of particles in the particle block

Implemented in geos::ParticleBlock.

The documentation for this class was generated from the following file:

coreComponents/mesh/generators/ParticleBlockABC.hpp

Public Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ ParticleBlockABC()

Member Function Documentation

◆ forExternalProperties()

◆ getParticleCenter()

◆ getParticleDamage()

◆ getParticleGroup()

◆ getParticleID()

◆ getParticleMaterialDirection()

◆ getParticleRVectors()

◆ getParticleStrengthScale()

◆ getParticleSurfaceFlag()

◆ getParticleType()

◆ getParticleVelocity()

◆ getParticleVolume()

◆ hasRVectors()

◆ localToGlobalMap()

◆ numParticles()