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| | TableFunction (const string &name, dataRepository::Group *const parent) |
| | The constructor. More...
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virtual void | initializeFunction () override |
| | Initialize the table function.
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void | reInitializeFunction () |
| | Build the maps used to evaluate the table function.
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| virtual void | evaluate (dataRepository::Group const &group, real64 const time, SortedArrayView< localIndex const > const &set, arrayView1d< real64 > const &result) const override final |
| | Method to evaluate a function on a target object. More...
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| virtual real64 | evaluate (real64 const *const input) const override final |
| | Method to evaluate a function. More...
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| void | checkCoord (real64 coord, localIndex dim) const |
| | Check if the given coordinate is in the bounds of the table coordinates in the specified dimension, throw an exception otherwise. More...
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| integer | numDimensions () const |
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| ArrayOfArraysView< real64 const > | getCoordinates () const |
| | Get the table axes definitions. More...
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| ArrayOfArraysView< real64 > | getCoordinates () |
| | Get the table axes definitions. More...
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| arrayView1d< real64 const > | getValues () const |
| | Get the table values. More...
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| array1d< real64 > & | getValues () |
| | Get the table values. More...
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| InterpolationType | getInterpolationMethod () const |
| | Get the interpolation method. More...
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| units::Unit | getDimUnit (localIndex const dim) const |
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| void | setInterpolationMethod (InterpolationType const method) |
| | Set the interpolation method. More...
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| void | setTableCoordinates (array1d< real64_array > const &coordinates, std::vector< units::Unit > const &dimUnits={}) |
| | Set the table coordinates. More...
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| void | setDimUnits (std::vector< units::Unit > const &dimUnits) |
| | Set the units of each dimension. More...
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| void | setTableValues (real64_array values, units::Unit unit=units::Unknown) |
| | Set the table values. More...
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| void | setValueUnits (units::Unit unit) |
| | Set the table value units. More...
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| units::Unit | getValueUnit () const |
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| void | outputPVTTableData (OutputOptions const pvtOutputOpts) const |
| | Print the table(s) in the log and/or CSV files when requested by the user. More...
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| KernelWrapper | createKernelWrapper () const |
| | Create an instance of the kernel wrapper. More...
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| |
| | FunctionBase (const string &name, dataRepository::Group *const parent) |
| | Constructor. More...
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virtual | ~FunctionBase () override=default |
| | destructor
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| integer | isFunctionOfTime () const |
| | Test to see if the function is a 1D function of time. More...
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| real64_array | evaluateStats (dataRepository::Group const &group, real64 const time, SortedArray< localIndex > const &set) const |
| | This generates statistics by applying a function to an object. More...
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| void | setInputVarNames (string_array inputVarNames) |
| | Set the input variable names. More...
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| |
| template<typename LOG_LEVEL_INFO > |
| std::enable_if_t< geos::is_log_level_info< LOG_LEVEL_INFO >, void > | addLogLevel () |
| | Append a levelCondition and a log description to the description of the wrapped object given a log info struct. Must be called in constructor. More...
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| virtual bool | registerCallback (void *func, const std::type_info &funcType) |
| | Register a callback function on the group. More...
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virtual void | reinit () |
| | Performs re-initialization of certain variable depending on the solver being used.
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| | Group (string const &name, Group *const parent) |
| | Constructor. More...
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| |
| | Group (string const &name, conduit::Node &rootNode) |
| | Constructor. More...
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| |
| | Group (Group &&source)=default |
| | Move constructor. More...
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virtual | ~Group () |
| | Destructor, deletes all Groups and Wrappers owned by this Group.
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| Group ()=delete |
| | Deleted default constructor.
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| Group (Group const &)=delete |
| | Deleted copy constructor.
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| Group & | operator= (Group const &)=delete |
| | Deleted copy assignment operator. More...
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| Group & | operator= (Group &&)=delete |
| | Deleted move assignment operator. More...
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| void | printDataHierarchy (integer indent=0) const |
| | Prints the data hierarchy recursively. More...
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| string | dumpInputOptions () const |
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| string | dumpSubGroupsNames () const |
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| string | dumpWrappersNames () const |
| |
| template<typename T = Group> |
| T & | registerGroup (string const &name, std::unique_ptr< T > newObject) |
| | Register a new Group as a sub-group of current Group. More...
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| template<typename T = Group> |
| T & | registerGroup (string const &name, T *newObject) |
| | Register a new Group as a sub-group of current Group. More...
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| template<typename T = Group> |
| T & | registerGroup (string const &name) |
| | Register a new Group as a sub-group of current Group. More...
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| template<typename T = Group> |
| T & | registerGroup (subGroupMap::KeyIndex const &keyIndex) |
| | Register a new Group as a sub-group of current Group. More...
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| template<typename T = Group, typename TBASE = Group> |
| T & | registerGroup (string const &name, string const &catalogName) |
| | Register a new Group as a sub-group of current Group. More...
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| void | deregisterGroup (string const &name) |
| | Removes a child group from this group. More...
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| virtual Group * | createChild (string const &childKey, string const &childName) |
| | Creates a new sub-Group using the ObjectCatalog functionality. More...
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| template<typename T = Group, typename KEY = void> |
| T * | getGroupPointer (KEY const &key) |
| | Return a pointer to a sub-group of the current Group. More...
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| template<typename T = Group, typename KEY = void> |
| T const * | getGroupPointer (KEY const &key) const |
| | Return a pointer to a sub-group of the current Group. More...
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| template<typename T = Group, typename KEY = void> |
| T & | getGroup (KEY const &key) |
| | Return a reference to a sub-group of the current Group. More...
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| template<typename T = Group, typename KEY = void> |
| T const & | getGroup (KEY const &key) const |
| | Return a reference to a sub-group of the current Group. More...
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| template<typename T = Group> |
| T & | getGroupByPath (string const &path) |
| | Retrieve a group from the hierarchy using a path. More...
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| template<typename T = Group> |
| T const & | getGroupByPath (string const &path) const |
| | Retrieve a group from the hierarchy using a path. More...
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| subGroupMap & | getSubGroups () |
| | Get the subgroups object. More...
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| subGroupMap const & | getSubGroups () const |
| | Get the subgroups object. More...
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| localIndex | numSubGroups () const |
| | return the number of sub groups in this Group More...
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| std::vector< string > | getSubGroupsNames () const |
| |
| template<typename T = Group> |
| bool | hasGroup (string const &name) const |
| | Check whether a sub-group exists. More...
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| template<typename T > |
| bool | hasSubGroupOfType () const |
| | Check whether a sub-group exists by type. More...
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| |
| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA > |
| void | forSubGroups (LAMBDA &&lambda) |
| | Apply the given functor to subgroups that can be casted to one of specified types. More...
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| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA > |
| void | forSubGroups (LAMBDA &&lambda) const |
| | Apply the given functor to subgroups that can be casted to one of specified types. More...
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| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA > |
| void | forSubGroupsIndex (LAMBDA &&lambda) |
| | Apply the given functor to subgroups that can be casted to one of specified types. More...
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| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA > |
| void | forSubGroupsIndex (LAMBDA &&lambda) const |
| | Apply the given functor to subgroups that can be casted to one of specified types. More...
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| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LOOKUP_CONTAINER , typename LAMBDA > |
| void | forSubGroups (LOOKUP_CONTAINER const &subGroupKeys, LAMBDA &&lambda) |
| | Apply the given functor to subgroups that can be casted to one of specified types. More...
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| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LOOKUP_CONTAINER , typename LAMBDA > |
| void | forSubGroups (LOOKUP_CONTAINER const &subGroupKeys, LAMBDA &&lambda) const |
| | Apply the given functor to subgroups that can be casted to one of specified types. More...
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| template<typename LAMBDA > |
| void | forWrappers (LAMBDA &&lambda) |
| | Apply the given functor to wrappers. More...
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| template<typename LAMBDA > |
| void | forWrappers (LAMBDA &&lambda) const |
| | Apply the given functor to wrappers. More...
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| template<typename TYPE , typename ... TYPES, typename LAMBDA > |
| void | forWrappers (LAMBDA &&lambda) |
| | Apply the given functor to wrappers that can be cast to one of specified types. More...
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| template<typename TYPE , typename ... TYPES, typename LAMBDA > |
| void | forWrappers (LAMBDA &&lambda) const |
| | Apply the given functor to wrappers that can be cast to one of specified types. More...
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virtual void | initialize_postMeshGeneration () |
| | initialization post generation of the mesh.
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| void | initialize () |
| | Run initialization functions on this and all subgroups. More...
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| virtual void | initializationOrder (string_array &order) |
| | Sets the initialization order for sub-Groups. More...
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| void | initializePostInitialConditions () |
| | Initialization routine to be called after calling ApplyInitialConditions(). More...
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| void | postRestartInitializationRecursive () |
| | Initialization routine to be called after calling reading a restart file. More...
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| void | processInputFileRecursive (xmlWrapper::xmlDocument &xmlDocument, xmlWrapper::xmlNode &targetNode) |
| | Recursively read values using ProcessInputFile() from the input file and put them into the wrapped values for this group. Also add the includes content to the xmlDocument when Include nodes are encountered. More...
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| void | processInputFileRecursive (xmlWrapper::xmlDocument &xmlDocument, xmlWrapper::xmlNode &targetNode, xmlWrapper::xmlNodePos const &nodePos) |
| | Same as processInputFileRecursive(xmlWrapper::xmlDocument &, xmlWrapper::xmlNode &) but allow to reuse an existing xmlNodePos. More...
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void | postInputInitializationRecursive () |
| | Recursively call postInputInitialization() to apply post processing after reading input values.
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| template<typename T , typename TBASE = T> |
| Wrapper< TBASE > & | registerWrapper (string const &name, wrapperMap::KeyIndex::index_type *const rkey=nullptr) |
| | Create and register a Wrapper around a new object. More...
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| template<typename T , typename TBASE = T> |
| Wrapper< TBASE > & | registerWrapper (Group::wrapperMap::KeyIndex const &viewKey) |
| | Create and register a Wrapper around a new object. More...
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| template<typename T > |
| Wrapper< T > & | registerWrapper (string const &name, std::unique_ptr< T > newObject) |
| | Register a Wrapper around a given object and take ownership. More...
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| template<typename T > |
| Wrapper< T > & | registerWrapper (string const &name, T *newObject) |
| | Register a Wrapper around an existing object, does not take ownership of the object. More...
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| WrapperBase & | registerWrapper (std::unique_ptr< WrapperBase > wrapper) |
| | Register and take ownership of an existing Wrapper. More...
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| void | deregisterWrapper (string const &name) |
| | Removes a Wrapper from this group. More...
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| void | generateDataStructureSkeleton (integer const level) |
| | Build a complete datastructure for schema generation. More...
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virtual void | expandObjectCatalogs () |
| | Expand any catalogs in the data structure.
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| virtual void | setSchemaDeviations (xmlWrapper::xmlNode schemaRoot, xmlWrapper::xmlNode schemaParent, integer documentationType) |
| | Inform the schema generator of any deviations between the xml and GEOS data structures. More...
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| virtual void | registerDataOnMeshRecursive (Group &meshBodies) |
| | Calls RegisterDataOnMesh() recursively. More...
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| virtual void | registerDataOnMesh (Group &meshBodies) |
| | Register data on mesh entities. More...
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| virtual localIndex | packSize (string_array const &wrapperNames, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| | Get the size required to pack a list of wrappers. More...
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| virtual localIndex | packSize (string_array const &wrapperNames, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| | Get the size required to pack a list of indices within a list of wrappers. More...
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| localIndex | packSize (arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| | Get the size required to pack a list of indices for all registered wrappers. More...
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| virtual localIndex | pack (buffer_unit_type *&buffer, string_array const &wrapperNames, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| | Pack a list of wrappers to a buffer. More...
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| virtual localIndex | pack (buffer_unit_type *&buffer, string_array const &wrapperNames, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| | Pack a list of indices within a list of wrappers. More...
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| localIndex | pack (buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| | Pack a list of indices for all registered wrappers. More...
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| virtual localIndex | unpack (buffer_unit_type const *&buffer, arrayView1d< localIndex > &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events, MPI_Op op=MPI_REPLACE) |
| | Unpack a buffer. More...
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| template<typename KEY > |
| WrapperBase const & | getWrapperBase (KEY const &key) const |
| | Return a reference to a WrapperBase stored in this group. More...
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| template<typename KEY > |
| WrapperBase & | getWrapperBase (KEY const &key) |
| | Return a reference to a WrapperBase stored in this group. More...
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| indexType | getWrapperIndex (string const &name) const |
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| wrapperMap const & | wrappers () const |
| | Get access to the internal wrapper storage. More...
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| wrapperMap & | wrappers () |
| | Get access to the internal wrapper storage. More...
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| indexType | numWrappers () const |
| | Return the number of wrappers. More...
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| std::vector< string > | getWrappersNames () const |
| |
| template<typename LOOKUP_TYPE > |
| bool | hasWrapper (LOOKUP_TYPE const &lookup) const |
| | Check if a wrapper exists. More...
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| template<typename T , typename LOOKUP_TYPE > |
| Wrapper< T > const & | getWrapper (LOOKUP_TYPE const &index) const |
| | Retrieve a Wrapper stored in this group. More...
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| template<typename T , typename LOOKUP_TYPE > |
| Wrapper< T > & | getWrapper (LOOKUP_TYPE const &index) |
| | Retrieve a Wrapper stored in this group. More...
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| template<typename T , typename LOOKUP_TYPE > |
| Wrapper< T > const * | getWrapperPointer (LOOKUP_TYPE const &index) const |
| | Retrieve a Wrapper stored in this group. More...
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| template<typename T , typename LOOKUP_TYPE > |
| Wrapper< T > * | getWrapperPointer (LOOKUP_TYPE const &index) |
| | Retrieve a Wrapper stored in this group. More...
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| template<typename T , typename LOOKUP_TYPE > |
| GEOS_DECLTYPE_AUTO_RETURN | getReference (LOOKUP_TYPE const &lookup) const |
| | Look up a wrapper and get reference to wrapped object. More...
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| template<typename T , typename LOOKUP_TYPE > |
| T & | getReference (LOOKUP_TYPE const &lookup) |
| | Look up a wrapper and get reference to wrapped object. More...
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| virtual void | resize (localIndex const newSize) |
| | Resize the group and all contained wrappers that resize with parent. More...
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| virtual void | reserve (indexType const newsize) |
| | Set the new capacity and reserve it in all wrappers that resize with parent. More...
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| localIndex | capacity () const |
| | Get the "capacity" of the group, which determines the capacity of resizable wrappers. More...
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| localIndex | size () const |
| | Get the "size" of the group, which determines the number of elements in resizable wrappers. More...
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| string const & | getName () const |
| | Get group name. More...
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| string | getPath () const |
| | Return the path of this Group in the data repository. Starts with '/' followed by the hierarchy of the children of the "Problem" in which the Group is. More...
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| DataContext const & | getDataContext () const |
| |
| template<typename KEY > |
| DataContext const & | getWrapperDataContext (KEY key) const |
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| Group & | getParent () |
| | Access the group's parent. More...
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| Group const & | getParent () const |
| | Access the group's parent. More...
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| bool | hasParent () const |
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| localIndex | getIndexInParent () const |
| | Get the group's index within its parent group. More...
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| localIndex | getSubGroupIndex (keyType const &key) const |
| | Get the index of a sub-Group within this group. More...
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| int | sizedFromParent () const |
| | Check whether this Group is resized when its parent is resized. More...
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| Group & | setSizedFromParent (int val) |
| | Set whether this wrapper is resized when its parent is resized. More...
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| RestartFlags | getRestartFlags () const |
| | Get flags that control restart output of this group. More...
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| void | setRestartFlags (RestartFlags flags) |
| | Set flags that control restart output of this group. More...
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| InputFlags | getInputFlags () const |
| | Get input flags for schema generation. More...
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| void | setInputFlags (InputFlags flags) |
| | Set input flags for schema generation. More...
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| conduit::Node & | getConduitNode () |
| | Return the Conduit node object associated with this group. More...
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| conduit::Node const & | getConduitNode () const |
| | Return the Conduit node object associated with this group. More...
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void | prepareToWrite () |
| | Register the group and its wrappers with Conduit.
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void | finishWriting () |
| | Write the group and its wrappers into Conduit.
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void | loadFromConduit () |
| | Read the group and its wrappers from Conduit.
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| void | enableLogLevelInput () |
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| void | setLogLevel (integer const logLevel) |
| | Set verbosity level. More...
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| integer | getLogLevel () const |
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Public Types inherited from geos::FunctionBase