#include <StencilDataCollection.hpp>
Inheritance diagram for geos::StencilDataCollection:
Classes | |
| struct | KernelConnectionData |
| Element-element connection data extracted from the kernel. More... | |
| struct | viewKeyStruct |
Public Member Functions | |
| StencilDataCollection (const string &name, dataRepository::Group *const parent) | |
| Constructor for the statistics class. More... | |
| virtual bool | execute (real64 const time_n, real64 const dt, integer const cycleNumber, integer const eventCounter, real64 const eventProgress, DomainPartition &domain) override |
| Main extension point of executable targets. More... | |
 Public Member Functions inherited from geos::TaskBase | |
| TaskBase (string const &name, Group *const parent) | |
| Constructor. More... | |
| void | postInputInitialization () override |
| Public Member Functions inherited from geos::ExecutableGroup | |
| virtual void | signalToPrepareForExecution (real64 const time_n, real64 const dt, integer const cycle, DomainPartition &domain) |
| Inform the object that it expects to execute during the next timestep. More... | |
| virtual void | cleanup (real64 const time_n, integer const cycleNumber, integer const eventCounter, real64 const eventProgress, DomainPartition &domain) |
| Called as the code exits the main run loop. More... | |
| virtual real64 | getTimestepRequest (real64 const time) |
| Supplies the timestep request for this target to the event manager. More... | |
| void | setTimesteppingBehavior (TimesteppingBehavior const timesteppingBehavior) |
| Set the timestep behavior for a target. More... | |
| TimesteppingBehavior | getTimesteppingBehavior () const |
| Get the target's time step behavior. More... | |
| Public Member Functions inherited from geos::dataRepository::Group | |
| template<typename LOG_LEVEL_INFO > | |
| std::enable_if_t< geos::is_log_level_info< LOG_LEVEL_INFO >, void > | addLogLevel () |
| Append a levelCondition and a log description to the description of the wrapped object given a log info struct. Must be called in constructor. More... | |
| virtual bool | registerCallback (void *func, const std::type_info &funcType) |
| Register a callback function on the group. More... | |
| virtual void | reinit () |
| Performs re-initialization of certain variable depending on the solver being used. | |
| Group (string const &name, Group *const parent) | |
| Constructor. More... | |
| Group (string const &name, conduit::Node &rootNode) | |
| Constructor. More... | |
| Group (Group &&source)=default | |
| Move constructor. More... | |
| virtual | ~Group () |
| Destructor, deletes all Groups and Wrappers owned by this Group. | |
| Group ()=delete | |
| Deleted default constructor. | |
| Group (Group const &)=delete | |
| Deleted copy constructor. | |
| Group & | operator= (Group const &)=delete |
| Deleted copy assignment operator. More... | |
| Group & | operator= (Group &&)=delete |
| Deleted move assignment operator. More... | |
| void | printDataHierarchy (integer indent=0) const |
| Prints the data hierarchy recursively. More... | |
| string | dumpInputOptions () const |
| string | dumpSubGroupsNames () const |
| string | dumpWrappersNames () const |
| template<typename T = Group> | |
| T & | registerGroup (string const &name, std::unique_ptr< T > newObject) |
| Register a new Group as a sub-group of current Group. More... | |
| template<typename T = Group> | |
| T & | registerGroup (string const &name, T *newObject) |
| Register a new Group as a sub-group of current Group. More... | |
| template<typename T = Group> | |
| T & | registerGroup (string const &name) |
| Register a new Group as a sub-group of current Group. More... | |
| template<typename T = Group> | |
| T & | registerGroup (subGroupMap::KeyIndex const &keyIndex) |
| Register a new Group as a sub-group of current Group. More... | |
| template<typename T = Group, typename TBASE = Group> | |
| T & | registerGroup (string const &name, string const &catalogName) |
| Register a new Group as a sub-group of current Group. More... | |
| void | deregisterGroup (string const &name) |
| Removes a child group from this group. More... | |
| virtual Group * | createChild (string const &childKey, string const &childName) |
| Creates a new sub-Group using the ObjectCatalog functionality. More... | |
| template<typename T = Group, typename KEY = void> | |
| T * | getGroupPointer (KEY const &key) |
| Return a pointer to a sub-group of the current Group. More... | |
| template<typename T = Group, typename KEY = void> | |
| T const * | getGroupPointer (KEY const &key) const |
| Return a pointer to a sub-group of the current Group. More... | |
| template<typename T = Group, typename KEY = void> | |
| T & | getGroup (KEY const &key) |
| Return a reference to a sub-group of the current Group. More... | |
| template<typename T = Group, typename KEY = void> | |
| T const & | getGroup (KEY const &key) const |
| Return a reference to a sub-group of the current Group. More... | |
| template<typename T = Group> | |
| T & | getGroupByPath (string const &path) |
| Retrieve a group from the hierarchy using a path. More... | |
| template<typename T = Group> | |
| T const & | getGroupByPath (string const &path) const |
| Retrieve a group from the hierarchy using a path. More... | |
| subGroupMap & | getSubGroups () |
| Get the subgroups object. More... | |
| subGroupMap const & | getSubGroups () const |
| Get the subgroups object. More... | |
| localIndex | numSubGroups () const |
| return the number of sub groups in this Group More... | |
| std::vector< string > | getSubGroupsNames () const |
| template<typename T = Group> | |
| bool | hasGroup (string const &name) const |
| Check whether a sub-group exists. More... | |
| template<typename T > | |
| bool | hasSubGroupOfType () const |
| Check whether a sub-group exists by type. More... | |
| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA > | |
| void | forSubGroups (LAMBDA &&lambda) |
| Apply the given functor to subgroups that can be casted to one of specified types. More... | |
| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA > | |
| void | forSubGroups (LAMBDA &&lambda) const |
| Apply the given functor to subgroups that can be casted to one of specified types. More... | |
| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA > | |
| void | forSubGroupsIndex (LAMBDA &&lambda) |
| Apply the given functor to subgroups that can be casted to one of specified types. More... | |
| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LAMBDA > | |
| void | forSubGroupsIndex (LAMBDA &&lambda) const |
| Apply the given functor to subgroups that can be casted to one of specified types. More... | |
| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LOOKUP_CONTAINER , typename LAMBDA > | |
| void | forSubGroups (LOOKUP_CONTAINER const &subGroupKeys, LAMBDA &&lambda) |
| Apply the given functor to subgroups that can be casted to one of specified types. More... | |
| template<typename GROUPTYPE = Group, typename ... GROUPTYPES, typename LOOKUP_CONTAINER , typename LAMBDA > | |
| void | forSubGroups (LOOKUP_CONTAINER const &subGroupKeys, LAMBDA &&lambda) const |
| Apply the given functor to subgroups that can be casted to one of specified types. More... | |
| template<typename LAMBDA > | |
| void | forWrappers (LAMBDA &&lambda) |
| Apply the given functor to wrappers. More... | |
| template<typename LAMBDA > | |
| void | forWrappers (LAMBDA &&lambda) const |
| Apply the given functor to wrappers. More... | |
| template<typename TYPE , typename ... TYPES, typename LAMBDA > | |
| void | forWrappers (LAMBDA &&lambda) |
| Apply the given functor to wrappers that can be cast to one of specified types. More... | |
| template<typename TYPE , typename ... TYPES, typename LAMBDA > | |
| void | forWrappers (LAMBDA &&lambda) const |
| Apply the given functor to wrappers that can be cast to one of specified types. More... | |
| virtual void | initialize_postMeshGeneration () |
| initialization post generation of the mesh. | |
| void | initialize () |
| Run initialization functions on this and all subgroups. More... | |
| virtual void | initializationOrder (string_array &order) |
| Sets the initialization order for sub-Groups. More... | |
| void | initializePostInitialConditions () |
| Initialization routine to be called after calling ApplyInitialConditions(). More... | |
| void | postRestartInitializationRecursive () |
| Initialization routine to be called after calling reading a restart file. More... | |
| void | processInputFileRecursive (xmlWrapper::xmlDocument &xmlDocument, xmlWrapper::xmlNode &targetNode) |
Recursively read values using ProcessInputFile() from the input file and put them into the wrapped values for this group. Also add the includes content to the xmlDocument when Include nodes are encountered. More... | |
| void | processInputFileRecursive (xmlWrapper::xmlDocument &xmlDocument, xmlWrapper::xmlNode &targetNode, xmlWrapper::xmlNodePos const &nodePos) |
| Same as processInputFileRecursive(xmlWrapper::xmlDocument &, xmlWrapper::xmlNode &) but allow to reuse an existing xmlNodePos. More... | |
| void | postInputInitializationRecursive () |
| Recursively call postInputInitialization() to apply post processing after reading input values. | |
| template<typename T , typename TBASE = T> | |
| Wrapper< TBASE > & | registerWrapper (string const &name, wrapperMap::KeyIndex::index_type *const rkey=nullptr) |
| Create and register a Wrapper around a new object. More... | |
| template<typename T , typename TBASE = T> | |
| Wrapper< TBASE > & | registerWrapper (Group::wrapperMap::KeyIndex const &viewKey) |
| Create and register a Wrapper around a new object. More... | |
| template<typename T > | |
| Wrapper< T > & | registerWrapper (string const &name, std::unique_ptr< T > newObject) |
| Register a Wrapper around a given object and take ownership. More... | |
| template<typename T > | |
| Wrapper< T > & | registerWrapper (string const &name, T *newObject) |
| Register a Wrapper around an existing object, does not take ownership of the object. More... | |
| WrapperBase & | registerWrapper (std::unique_ptr< WrapperBase > wrapper) |
| Register and take ownership of an existing Wrapper. More... | |
| void | deregisterWrapper (string const &name) |
| Removes a Wrapper from this group. More... | |
| void | generateDataStructureSkeleton (integer const level) |
| Build a complete datastructure for schema generation. More... | |
| virtual void | expandObjectCatalogs () |
| Expand any catalogs in the data structure. | |
| virtual void | setSchemaDeviations (xmlWrapper::xmlNode schemaRoot, xmlWrapper::xmlNode schemaParent, integer documentationType) |
| Inform the schema generator of any deviations between the xml and GEOS data structures. More... | |
| virtual void | registerDataOnMeshRecursive (Group &meshBodies) |
| Calls RegisterDataOnMesh() recursively. More... | |
| virtual void | registerDataOnMesh (Group &meshBodies) |
| Register data on mesh entities. More... | |
| virtual localIndex | packSize (string_array const &wrapperNames, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| Get the size required to pack a list of wrappers. More... | |
| virtual localIndex | packSize (string_array const &wrapperNames, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| Get the size required to pack a list of indices within a list of wrappers. More... | |
| localIndex | packSize (arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| Get the size required to pack a list of indices for all registered wrappers. More... | |
| virtual localIndex | pack (buffer_unit_type *&buffer, string_array const &wrapperNames, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| Pack a list of wrappers to a buffer. More... | |
| virtual localIndex | pack (buffer_unit_type *&buffer, string_array const &wrapperNames, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| Pack a list of indices within a list of wrappers. More... | |
| localIndex | pack (buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const |
| Pack a list of indices for all registered wrappers. More... | |
| virtual localIndex | unpack (buffer_unit_type const *&buffer, arrayView1d< localIndex > &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events, MPI_Op op=MPI_REPLACE) |
| Unpack a buffer. More... | |
| template<typename KEY > | |
| WrapperBase const & | getWrapperBase (KEY const &key) const |
| Return a reference to a WrapperBase stored in this group. More... | |
| template<typename KEY > | |
| WrapperBase & | getWrapperBase (KEY const &key) |
| Return a reference to a WrapperBase stored in this group. More... | |
| indexType | getWrapperIndex (string const &name) const |
| wrapperMap const & | wrappers () const |
| Get access to the internal wrapper storage. More... | |
| wrapperMap & | wrappers () |
| Get access to the internal wrapper storage. More... | |
| indexType | numWrappers () const |
| Return the number of wrappers. More... | |
| std::vector< string > | getWrappersNames () const |
| template<typename LOOKUP_TYPE > | |
| bool | hasWrapper (LOOKUP_TYPE const &lookup) const |
| Check if a wrapper exists. More... | |
| template<typename T , typename LOOKUP_TYPE > | |
| Wrapper< T > const & | getWrapper (LOOKUP_TYPE const &index) const |
| Retrieve a Wrapper stored in this group. More... | |
| template<typename T , typename LOOKUP_TYPE > | |
| Wrapper< T > & | getWrapper (LOOKUP_TYPE const &index) |
| Retrieve a Wrapper stored in this group. More... | |
| template<typename T , typename LOOKUP_TYPE > | |
| Wrapper< T > const * | getWrapperPointer (LOOKUP_TYPE const &index) const |
| Retrieve a Wrapper stored in this group. More... | |
| template<typename T , typename LOOKUP_TYPE > | |
| Wrapper< T > * | getWrapperPointer (LOOKUP_TYPE const &index) |
| Retrieve a Wrapper stored in this group. More... | |
| template<typename T , typename LOOKUP_TYPE > | |
| GEOS_DECLTYPE_AUTO_RETURN | getReference (LOOKUP_TYPE const &lookup) const |
| Look up a wrapper and get reference to wrapped object. More... | |
| template<typename T , typename LOOKUP_TYPE > | |
| T & | getReference (LOOKUP_TYPE const &lookup) |
| Look up a wrapper and get reference to wrapped object. More... | |
| virtual void | resize (localIndex const newSize) |
| Resize the group and all contained wrappers that resize with parent. More... | |
| virtual void | reserve (indexType const newsize) |
| Set the new capacity and reserve it in all wrappers that resize with parent. More... | |
| localIndex | capacity () const |
| Get the "capacity" of the group, which determines the capacity of resizable wrappers. More... | |
| localIndex | size () const |
| Get the "size" of the group, which determines the number of elements in resizable wrappers. More... | |
| string const & | getName () const |
| Get group name. More... | |
| string | getPath () const |
| Return the path of this Group in the data repository. Starts with '/' followed by the hierarchy of the children of the "Problem" in which the Group is. More... | |
| DataContext const & | getDataContext () const |
| template<typename KEY > | |
| DataContext const & | getWrapperDataContext (KEY key) const |
| Group & | getParent () |
| Access the group's parent. More... | |
| Group const & | getParent () const |
| Access the group's parent. More... | |
| bool | hasParent () const |
| localIndex | getIndexInParent () const |
| Get the group's index within its parent group. More... | |
| localIndex | getSubGroupIndex (keyType const &key) const |
| Get the index of a sub-Group within this group. More... | |
| int | sizedFromParent () const |
| Check whether this Group is resized when its parent is resized. More... | |
| Group & | setSizedFromParent (int val) |
| Set whether this wrapper is resized when its parent is resized. More... | |
| RestartFlags | getRestartFlags () const |
| Get flags that control restart output of this group. More... | |
| void | setRestartFlags (RestartFlags flags) |
| Set flags that control restart output of this group. More... | |
| InputFlags | getInputFlags () const |
| Get input flags for schema generation. More... | |
| void | setInputFlags (InputFlags flags) |
| Set input flags for schema generation. More... | |
| conduit::Node & | getConduitNode () |
| Return the Conduit node object associated with this group. More... | |
| conduit::Node const & | getConduitNode () const |
| Return the Conduit node object associated with this group. More... | |
| void | prepareToWrite () |
| Register the group and its wrappers with Conduit. | |
| void | finishWriting () |
| Write the group and its wrappers into Conduit. | |
| void | loadFromConduit () |
| Read the group and its wrappers from Conduit. | |
| void | enableLogLevelInput () |
| void | setLogLevel (integer const logLevel) |
| Set verbosity level. More... | |
| integer | getLogLevel () const |
Static Public Member Functions | |
| static string | catalogName () |
| Accessor for the catalog name. | |
| Static Public Member Functions inherited from geos::TaskBase | |
| static CatalogInterface::CatalogType & | getCatalog () |
| Get the catalog interface for the TaskBase. More... | |
| Static Public Member Functions inherited from geos::dataRepository::Group | |
| template<typename T0 , typename T1 , typename ... CASTTYPES, typename CONTAINERTYPE , typename LAMBDA > | |
| static bool | applyLambdaToContainer (CONTAINERTYPE &container, LAMBDA &&lambda) |
| Apply a given functor to a container if the container can be cast to one of the specified types. More... | |
| static CatalogInterface::CatalogType & | getCatalog () |
| Get the singleton catalog for this Group. More... | |
Additional Inherited Members | |
| Public Types inherited from geos::TaskBase | |
| using | CatalogInterface = dataRepository::CatalogInterface< TaskBase, string const &, Group *const > |
| The catalog interface type for TaskBase. | |
| Public Types inherited from geos::ExecutableGroup | |
| enum class | TimesteppingBehavior : integer { DeterminesTimeStepSize , DoesNotDetermineTimeStepSize } |
| Timestepping type. More... | |
| Public Types inherited from geos::dataRepository::Group | |
| using | subGroupMap = MappedVector< Group, Group *, keyType, indexType > |
| The template specialization of MappedVector to use for the collection of sub-Group objects. | |
| using | wrapperMap = MappedVector< WrapperBase, WrapperBase *, keyType, indexType > |
| The template specialization of MappedVector to use for the collection wrappers objects. | |
| using | CatalogInterface = dataRepository::CatalogInterface< Group, string const &, Group *const > |
| Type alias for catalog interface used by this class. See CatalogInterface. | |
| Protected Member Functions inherited from geos::dataRepository::Group | |
| virtual void | initializePreSubGroups () |
| Called by Initialize() prior to initializing sub-Groups. | |
| virtual void | initializePostSubGroups () |
| Called by Initialize() after to initializing sub-Groups. | |
| virtual void | initializePostInitialConditionsPreSubGroups () |
| Called by InitializePostInitialConditions() prior to initializing sub-Groups. | |
| virtual void | postRestartInitialization () |
| Performs initialization required after reading from a restart file. | |
Detailed Description
Task class allowing the ouput of communicating elements data. Only current usage is to output the cell-cell transmissibility (= "CellToCellDataCollection"), but we could add more implementations to output the transmissibility of boundary or surface connections (or everything that is managed by the stencils).
Definition at line 36 of file StencilDataCollection.hpp.
Constructor & Destructor Documentation
◆ StencilDataCollection()
| geos::StencilDataCollection::StencilDataCollection | ( | const string & | name, |
| dataRepository::Group *const | parent | ||
| ) |
Constructor for the statistics class.
- Parameters
-
[in] name the name of the task coming from the xml [in] parent the parent group of the task
The documentation for this class was generated from the following file:
- coreComponents/physicsSolvers/fluidFlow/StencilDataCollection.hpp
