activeParticleIndices() const | geos::ParticleSubRegionBase | inline |
addLogLevel() | geos::dataRepository::Group | |
addNeighbor(int const rank) | geos::ObjectManagerBase | inline |
applyLambdaToContainer(CONTAINERTYPE &container, LAMBDA &&lambda) | geos::dataRepository::Group | inlinestatic |
capacity() const | geos::dataRepository::Group | inline |
CatalogInterface typedef | geos::ObjectManagerBase | |
cleanUpMap(std::set< localIndex > const &targetIndices, array1d< SortedArray< localIndex > > &upmap, arrayView2d< localIndex const > const &downmap) | geos::ObjectManagerBase | static |
cleanUpMap(std::set< localIndex > const &targetIndices, ArrayOfSetsView< localIndex > const &upmap, arrayView2d< localIndex const > const &downmap) | geos::ObjectManagerBase | static |
cleanUpMap(std::set< localIndex > const &targetIndices, array1d< SortedArray< localIndex > > &upmap, arrayView1d< arrayView1d< localIndex const > const > const &downmap) | geos::ObjectManagerBase | static |
cleanUpMap(std::set< localIndex > const &targetIndices, ArrayOfSetsView< localIndex > const &upmap, arrayView1d< arrayView1d< localIndex const > const > const &downmap) | geos::ObjectManagerBase | static |
cleanUpMap(std::set< localIndex > const &targetIndices, ArrayOfSetsView< localIndex > const &upmap, ArrayOfArraysView< localIndex const > const &downmap) | geos::ObjectManagerBase | static |
constructGlobalListOfBoundaryObjects() const | geos::ObjectManagerBase | |
constructGlobalToLocalMap() | geos::ObjectManagerBase | |
constructSetFromSetAndMap(SortedArrayView< localIndex const > const &inputSet, const array2d< localIndex > &map, const string &setName) | geos::ObjectManagerBase | |
constructSetFromSetAndMap(SortedArrayView< localIndex const > const &inputSet, const array1d< localIndex_array > &map, const string &setName) | geos::ObjectManagerBase | |
constructSetFromSetAndMap(SortedArrayView< localIndex const > const &inputSet, ArrayOfArraysView< localIndex const > const &map, const string &setName) | geos::ObjectManagerBase | |
copyObject(localIndex const source, localIndex const destination) | geos::ObjectManagerBase | |
createChild(string const &childKey, string const &childName) | geos::dataRepository::Group | virtual |
createSet(const string &newSetName) | geos::ObjectManagerBase | |
deregisterGroup(string const &name) | geos::dataRepository::Group | |
deregisterWrapper(string const &name) | geos::dataRepository::Group | |
dumpInputOptions() const | geos::dataRepository::Group | |
dumpSubGroupsNames() const | geos::dataRepository::Group | |
dumpWrappersNames() const | geos::dataRepository::Group | |
enableLogLevelInput() | geos::dataRepository::Group | |
enforceStateFieldConsistencyPostTopologyChange(std::set< localIndex > const &targetIndices) | geos::ObjectManagerBase | virtual |
erase(std::set< localIndex > const &indicesToErase) | geos::ParticleSubRegionBase | |
eraseObject(std::set< localIndex > const &indicesToErase) | geos::ObjectManagerBase | |
excludeWrappersFromPacking(std::set< string > const &wrapperNames) | geos::ObjectManagerBase | |
expandObjectCatalogs() | geos::dataRepository::Group | inlinevirtual |
externalSet() | geos::ObjectManagerBase | inline |
externalSet() const | geos::ObjectManagerBase | inline |
extractMapFromObjectForAssignGlobalIndexNumbers(ObjectManagerBase const &nodeManager) | geos::ObjectManagerBase | inlinevirtual |
finishWriting() | geos::dataRepository::Group | |
fixUpDownMaps(TYPE_RELATION &relation, map< localIndex, array1d< globalIndex > > &unmappedIndices, bool const clearIfUnmapped) | geos::ObjectManagerBase | static |
fixUpDownMaps(TYPE_RELATION &relation, map< localIndex, SortedArray< globalIndex > > &unmappedIndices, bool const clearIfUnmapped) | geos::ObjectManagerBase | static |
fixUpDownMaps(ArrayOfSets< localIndex > &relation, unordered_map< globalIndex, localIndex > const &globalToLocal, map< localIndex, SortedArray< globalIndex > > &unmappedIndices, bool const clearIfUnmapped) | geos::ObjectManagerBase | inlinestatic |
forSubGroups(LAMBDA &&lambda) | geos::dataRepository::Group | inline |
forSubGroups(LAMBDA &&lambda) const | geos::dataRepository::Group | inline |
forSubGroups(LOOKUP_CONTAINER const &subGroupKeys, LAMBDA &&lambda) | geos::dataRepository::Group | inline |
forSubGroups(LOOKUP_CONTAINER const &subGroupKeys, LAMBDA &&lambda) const | geos::dataRepository::Group | inline |
forSubGroupsIndex(LAMBDA &&lambda) | geos::dataRepository::Group | inline |
forSubGroupsIndex(LAMBDA &&lambda) const | geos::dataRepository::Group | inline |
forWrappers(LAMBDA &&lambda) | geos::dataRepository::Group | inline |
forWrappers(LAMBDA &&lambda) const | geos::dataRepository::Group | inline |
forWrappers(LAMBDA &&lambda) | geos::dataRepository::Group | inline |
forWrappers(LAMBDA &&lambda) const | geos::dataRepository::Group | inline |
generateDataStructureSkeleton(integer const level) | geos::dataRepository::Group | inline |
getCatalog() | geos::ObjectManagerBase | static |
getCatalogName() const =0 | geos::ObjectManagerBase | pure virtual |
getConduitNode() | geos::dataRepository::Group | inline |
getConduitNode() const | geos::dataRepository::Group | inline |
getConstitutiveModel(string const &name) const | geos::ParticleSubRegionBase | inline |
getConstitutiveModel(string const &name) | geos::ParticleSubRegionBase | inline |
getConstitutiveModels() const | geos::ParticleSubRegionBase | inline |
getConstitutiveModels() | geos::ParticleSubRegionBase | inline |
getDataContext() const | geos::dataRepository::Group | inline |
getDomainBoundaryIndicator() | geos::ObjectManagerBase | inline |
getDomainBoundaryIndicator() const | geos::ObjectManagerBase | inline |
getField() const | geos::ObjectManagerBase | inline |
getField() | geos::ObjectManagerBase | inline |
getGroup(KEY const &key) | geos::dataRepository::Group | inline |
getGroup(KEY const &key) const | geos::dataRepository::Group | inline |
getGroupByPath(string const &path) | geos::dataRepository::Group | inline |
getGroupByPath(string const &path) const | geos::dataRepository::Group | inline |
getGroupPointer(KEY const &key) | geos::dataRepository::Group | inline |
getGroupPointer(KEY const &key) const | geos::dataRepository::Group | inline |
getIndexInParent() const | geos::dataRepository::Group | inline |
getInputFlags() const | geos::dataRepository::Group | inline |
getLogLevel() const | geos::dataRepository::Group | inline |
getName() const | geos::dataRepository::Group | inline |
getNeighborData(int const rank) | geos::ObjectManagerBase | inline |
getNeighborData(int const rank) const | geos::ObjectManagerBase | inline |
getNumberOfGhosts() const | geos::ObjectManagerBase | |
getNumberOfLocalIndices() const | geos::ObjectManagerBase | |
getParent() | geos::dataRepository::Group | inline |
getParent() const | geos::dataRepository::Group | inline |
getParentRecursive(arraySlice1d< localIndex const > const &parentIndices, localIndex const lookup) | geos::ObjectManagerBase | inlinestatic |
getParticleCenter() const | geos::ParticleSubRegionBase | inline |
getParticleCenter() | geos::ParticleSubRegionBase | inline |
getParticleDamage() const | geos::ParticleSubRegionBase | inline |
getParticleDamage() | geos::ParticleSubRegionBase | inline |
getParticleGroup() const | geos::ParticleSubRegionBase | inline |
getParticleGroup() | geos::ParticleSubRegionBase | inline |
getParticleID() const | geos::ParticleSubRegionBase | inline |
getParticleID() | geos::ParticleSubRegionBase | inline |
getParticleMaterialDirection() const | geos::ParticleSubRegionBase | inline |
getParticleMaterialDirection() | geos::ParticleSubRegionBase | inline |
getParticleRank() const | geos::ParticleSubRegionBase | inline |
getParticleRank() | geos::ParticleSubRegionBase | inline |
getParticleRVectors() const | geos::ParticleSubRegionBase | inline |
getParticleRVectors() | geos::ParticleSubRegionBase | inline |
getParticleStrengthScale() const | geos::ParticleSubRegionBase | inline |
getParticleStrengthScale() | geos::ParticleSubRegionBase | inline |
getParticleSurfaceFlag() const | geos::ParticleSubRegionBase | inline |
getParticleSurfaceFlag() | geos::ParticleSubRegionBase | inline |
getParticleType() const | geos::ParticleSubRegionBase | inline |
getParticleVelocity() const | geos::ParticleSubRegionBase | inline |
getParticleVelocity() | geos::ParticleSubRegionBase | inline |
getParticleVolume() const | geos::ParticleSubRegionBase | inline |
getParticleVolume() | geos::ParticleSubRegionBase | inline |
getPath() const | geos::dataRepository::Group | |
getReference(LOOKUP_TYPE const &lookup) const | geos::dataRepository::Group | inline |
getReference(LOOKUP_TYPE const &lookup) | geos::dataRepository::Group | inline |
getRestartFlags() const | geos::dataRepository::Group | inline |
getSet(string const &setName) | geos::ObjectManagerBase | inline |
getSet(string const &setName) const | geos::ObjectManagerBase | inline |
getSubGroupIndex(keyType const &key) const | geos::dataRepository::Group | |
getSubGroups() | geos::dataRepository::Group | inline |
getSubGroups() const | geos::dataRepository::Group | inline |
getSubGroupsNames() const | geos::dataRepository::Group | |
getWrapper(LOOKUP_TYPE const &index) const | geos::dataRepository::Group | inline |
getWrapper(LOOKUP_TYPE const &index) | geos::dataRepository::Group | inline |
getWrapperBase(KEY const &key) const | geos::dataRepository::Group | inline |
getWrapperBase(KEY const &key) | geos::dataRepository::Group | inline |
getWrapperDataContext(KEY key) const | geos::dataRepository::Group | inline |
getWrapperIndex(string const &name) const | geos::dataRepository::Group | inline |
getWrapperPointer(LOOKUP_TYPE const &index) const | geos::dataRepository::Group | inline |
getWrapperPointer(LOOKUP_TYPE const &index) | geos::dataRepository::Group | inline |
getWrappersNames() const | geos::dataRepository::Group | |
ghostRank() | geos::ObjectManagerBase | inline |
ghostRank() const | geos::ObjectManagerBase | inline |
globalToLocalMap() const | geos::ObjectManagerBase | inline |
globalToLocalMap(globalIndex const gid) const | geos::ObjectManagerBase | inline |
Group(string const &name, Group *const parent) | geos::dataRepository::Group | explicit |
Group(string const &name, conduit::Node &rootNode) | geos::dataRepository::Group | explicit |
Group(Group &&source)=default | geos::dataRepository::Group | |
Group()=delete | geos::dataRepository::Group | |
Group(Group const &)=delete | geos::dataRepository::Group | |
groupKeys() | geos::ObjectManagerBase | inlinevirtual |
groupKeys() const | geos::ObjectManagerBase | inlinevirtual |
hasField() const | geos::ObjectManagerBase | inline |
hasGroup(string const &name) const | geos::dataRepository::Group | inline |
hasParent() const | geos::dataRepository::Group | inline |
hasRVectors() const | geos::ParticleSubRegionBase | inline |
hasSubGroupOfType() const | geos::dataRepository::Group | inline |
hasWrapper(LOOKUP_TYPE const &lookup) const | geos::dataRepository::Group | inline |
inheritGhostRankFromParent(std::set< localIndex > const &indices) | geos::ObjectManagerBase | |
initializationOrder(string_array &order) | geos::dataRepository::Group | virtual |
initialize() | geos::dataRepository::Group | |
initialize_postMeshGeneration() | geos::dataRepository::Group | virtual |
initializePostInitialConditions() | geos::dataRepository::Group | |
initializePostInitialConditionsPostSubGroups() | geos::dataRepository::Group | inlineprotectedvirtual |
initializePostInitialConditionsPreSubGroups() | geos::dataRepository::Group | inlineprotectedvirtual |
initializePostSubGroups() | geos::dataRepository::Group | inlineprotectedvirtual |
initializePreSubGroups() | geos::dataRepository::Group | inlineprotectedvirtual |
isExternal() | geos::ObjectManagerBase | inline |
isExternal() const | geos::ObjectManagerBase | inline |
loadFromConduit() | geos::dataRepository::Group | |
localMaxGlobalIndex() const | geos::ObjectManagerBase | inline |
localToGlobalMap() | geos::ObjectManagerBase | inline |
localToGlobalMap() const | geos::ObjectManagerBase | inline |
m_activeParticleIndices | geos::ParticleSubRegionBase | protected |
m_domainBoundaryIndicator | geos::ObjectManagerBase | protected |
m_ghostRank | geos::ObjectManagerBase | protected |
m_globalToLocalMap | geos::ObjectManagerBase | protected |
m_hasRVectors | geos::ParticleSubRegionBase | protected |
m_isExternal | geos::ObjectManagerBase | protected |
m_localMaxGlobalIndex | geos::ObjectManagerBase | protected |
m_localToGlobalMap | geos::ObjectManagerBase | protected |
m_maxGlobalIndex | geos::ObjectManagerBase | protected |
m_neighborData | geos::ObjectManagerBase | protected |
m_neighborGroup | geos::ObjectManagerBase | protected |
m_neighborList | geos::ParticleSubRegionBase | protected |
m_numVerticesPerParticle | geos::ParticleSubRegionBase | protected |
m_ObjectManagerBaseGroupKeys | geos::ObjectManagerBase | |
m_ObjectManagerBaseViewKeys | geos::ObjectManagerBase | |
m_overAllocationFactor | geos::ObjectManagerBase | protected |
m_packingExclusionList | geos::ObjectManagerBase | protected |
m_particleCenter | geos::ParticleSubRegionBase | protected |
m_particleDamage | geos::ParticleSubRegionBase | protected |
m_particleGroup | geos::ParticleSubRegionBase | protected |
m_particleID | geos::ParticleSubRegionBase | protected |
m_particleMaterialDirection | geos::ParticleSubRegionBase | protected |
m_particleRank | geos::ParticleSubRegionBase | protected |
m_particleRVectors | geos::ParticleSubRegionBase | protected |
m_particleStrengthScale | geos::ParticleSubRegionBase | protected |
m_particleSurfaceFlag | geos::ParticleSubRegionBase | protected |
m_particleType | geos::ParticleSubRegionBase | protected |
m_particleVelocity | geos::ParticleSubRegionBase | protected |
m_particleVolume | geos::ParticleSubRegionBase | protected |
m_sets | geos::ObjectManagerBase | protected |
maxGlobalIndex() const | geos::ObjectManagerBase | inline |
moveSets(LvArray::MemorySpace const targetSpace) | geos::ObjectManagerBase | |
neighborList() const | geos::ParticleSubRegionBase | inline |
neighborList() | geos::ParticleSubRegionBase | inline |
numberOfVerticesPerParticle() const | geos::ParticleSubRegionBase | inline |
numSubGroups() const | geos::dataRepository::Group | inline |
numWrappers() const | geos::dataRepository::Group | inline |
ObjectManagerBase()=delete (defined in geos::ObjectManagerBase) | geos::ObjectManagerBase | |
ObjectManagerBase(string const &name, dataRepository::Group *const parent) | geos::ObjectManagerBase | explicit |
operator=(Group const &)=delete | geos::dataRepository::Group | |
operator=(Group &&)=delete | geos::dataRepository::Group | |
outputObjectConnectivity() const | geos::ObjectManagerBase | inlinevirtual |
pack(buffer_unit_type *&buffer, string_array const &wrapperNames, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const override | geos::ObjectManagerBase | virtual |
geos::dataRepository::Group::pack(buffer_unit_type *&buffer, string_array const &wrapperNames, integer const recursive, bool onDevice, parallelDeviceEvents &events) const | geos::dataRepository::Group | virtual |
geos::dataRepository::Group::pack(buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const | geos::dataRepository::Group | |
packGlobalMaps(buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList, integer const recursive) const | geos::ObjectManagerBase | virtual |
packGlobalMapsSize(arrayView1d< localIndex const > const &packList, integer const recursive) const | geos::ObjectManagerBase | virtual |
packParentChildMaps(buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList) const | geos::ObjectManagerBase | inline |
packParentChildMapsSize(arrayView1d< localIndex const > const &packList) const | geos::ObjectManagerBase | inline |
packSets(buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList) const | geos::ObjectManagerBase | |
packSize(string_array const &wrapperNames, arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const override | geos::ObjectManagerBase | virtual |
geos::dataRepository::Group::packSize(string_array const &wrapperNames, integer const recursive, bool onDevice, parallelDeviceEvents &events) const | geos::dataRepository::Group | virtual |
geos::dataRepository::Group::packSize(arrayView1d< localIndex const > const &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events) const | geos::dataRepository::Group | |
packUpDownMaps(buffer_unit_type *&buffer, arrayView1d< localIndex const > const &packList) const | geos::ObjectManagerBase | inlinevirtual |
packUpDownMapsSize(arrayView1d< localIndex const > const &packList) const | geos::ObjectManagerBase | inlinevirtual |
particlePack(buffer_type &buffer, arrayView1d< localIndex > const &localIndices, bool doPack) const | geos::ParticleSubRegionBase | |
ParticleSubRegionBase(string const &name, dataRepository::Group *const parent) | geos::ParticleSubRegionBase | |
particleUnpack(buffer_type &buffer, int const &startingIndex, int const &numberOfIncomingParticles) | geos::ParticleSubRegionBase | |
postInputInitialization() | geos::dataRepository::Group | inlineprotectedvirtual |
postInputInitializationRecursive() | geos::dataRepository::Group | |
postRestartInitialization() | geos::dataRepository::Group | inlineprotectedvirtual |
postRestartInitializationRecursive() | geos::dataRepository::Group | |
prepareToWrite() | geos::dataRepository::Group | |
printDataHierarchy(integer indent=0) const | geos::dataRepository::Group | |
processInputFileRecursive(xmlWrapper::xmlDocument &xmlDocument, xmlWrapper::xmlNode &targetNode) | geos::dataRepository::Group | |
processInputFileRecursive(xmlWrapper::xmlDocument &xmlDocument, xmlWrapper::xmlNode &targetNode, xmlWrapper::xmlNodePos const &nodePos) | geos::dataRepository::Group | |
registerCallback(void *func, const std::type_info &funcType) | geos::dataRepository::Group | inlinevirtual |
registerDataOnMesh(Group &meshBodies) | geos::dataRepository::Group | inlinevirtual |
registerDataOnMeshRecursive(Group &meshBodies) | geos::dataRepository::Group | virtual |
registerField(string const &nameOfRegisteringObject) | geos::ObjectManagerBase | inline |
registerField(FIELD_TRAIT const &fieldTrait, typename FIELD_TRAIT::type *newObject) | geos::ObjectManagerBase | inline |
registerField(string const &nameOfRegisteringObject) | geos::ObjectManagerBase | inline |
registerGroup(string const &name, std::unique_ptr< T > newObject) | geos::dataRepository::Group | inline |
registerGroup(string const &name, T *newObject) | geos::dataRepository::Group | inline |
registerGroup(string const &name) | geos::dataRepository::Group | inline |
registerGroup(subGroupMap::KeyIndex const &keyIndex) | geos::dataRepository::Group | inline |
registerGroup(string const &name, string const &catalogName) | geos::dataRepository::Group | inline |
registerWrapper(string const &name, wrapperMap::KeyIndex::index_type *const rkey=nullptr) | geos::dataRepository::Group | |
registerWrapper(Group::wrapperMap::KeyIndex const &viewKey) | geos::dataRepository::Group | |
registerWrapper(string const &name, std::unique_ptr< T > newObject) | geos::dataRepository::Group | |
registerWrapper(string const &name, T *newObject) | geos::dataRepository::Group | |
registerWrapper(std::unique_ptr< WrapperBase > wrapper) | geos::dataRepository::Group | |
reinit() | geos::dataRepository::Group | inlinevirtual |
removeNeighbor(int const rank) | geos::ObjectManagerBase | inline |
reserve(indexType const newsize) | geos::dataRepository::Group | virtual |
resize(localIndex const newSize, const bool) | geos::ObjectManagerBase | inline |
geos::dataRepository::Group::resize(localIndex const newSize) | geos::dataRepository::Group | virtual |
setActiveParticleIndices() | geos::ParticleSubRegionBase | |
setGhostRankForSenders(int const neighborRank) | geos::ObjectManagerBase | inline |
setHasRVectors(bool hasRVectors) | geos::ParticleSubRegionBase | inline |
setInputFlags(InputFlags flags) | geos::dataRepository::Group | inline |
setLogLevel(integer const logLevel) | geos::dataRepository::Group | inline |
setMaxGlobalIndex() | geos::ObjectManagerBase | virtual |
setNumberOfVerticesPerParticle(ParticleType const particleType) | geos::ParticleSubRegionBase | inlinevirtual |
setParticleCenter(array2d< real64 > particleCenter) | geos::ParticleSubRegionBase | inline |
setParticleType(ParticleType const particleType) | geos::ParticleSubRegionBase | inlinevirtual |
setReceiveLists() | geos::ObjectManagerBase | |
setRestartFlags(RestartFlags flags) | geos::dataRepository::Group | inline |
sets() | geos::ObjectManagerBase | inline |
sets() const | geos::ObjectManagerBase | inline |
setSchemaDeviations(xmlWrapper::xmlNode schemaRoot, xmlWrapper::xmlNode schemaParent, integer documentationType) | geos::dataRepository::Group | inlinevirtual |
setSizedFromParent(int val) | geos::dataRepository::Group | inline |
size() const | geos::dataRepository::Group | inline |
sizedFromParent() const | geos::dataRepository::Group | inline |
splitObject(localIndex const indexToSplit, int const rank, localIndex &newIndex) | geos::ObjectManagerBase | |
subGroupMap typedef | geos::dataRepository::Group | |
unpack(buffer_unit_type const *&buffer, arrayView1d< localIndex > &packList, integer const recursive, bool onDevice, parallelDeviceEvents &events, MPI_Op op=MPI_REPLACE) override | geos::ObjectManagerBase | virtual |
unpackGlobalMaps(buffer_unit_type const *&buffer, localIndex_array &packList, integer const recursive) | geos::ObjectManagerBase | virtual |
unpackParentChildMaps(buffer_unit_type const *&buffer, localIndex_array &packList) | geos::ObjectManagerBase | |
unpackSets(buffer_unit_type const *&buffer) | geos::ObjectManagerBase | |
unpackUpDownMaps(buffer_unit_type const *&buffer, array1d< localIndex > &packList, bool const overwriteUpMaps, bool const overwriteDownMaps) | geos::ObjectManagerBase | inlinevirtual |
updateGlobalToLocalMap(localIndex const lid) | geos::ObjectManagerBase | inline |
updateMaps() | geos::ParticleSubRegionBase | |
viewKeys() | geos::ObjectManagerBase | inlinevirtual |
viewKeys() const | geos::ObjectManagerBase | inlinevirtual |
wrapperMap typedef | geos::dataRepository::Group | |
wrappers() const | geos::dataRepository::Group | inline |
wrappers() | geos::dataRepository::Group | inline |
~Group() | geos::dataRepository::Group | virtual |
~ObjectManagerBase() override | geos::ObjectManagerBase | |
~ParticleSubRegionBase() | geos::ParticleSubRegionBase | |